Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_00017
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Entry
SFBmNL_00017 CDS
T03243
Name
(GenBank) 3'->5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
aso
Candidatus Arthromitus sp. SFB-mouse-NL
Brite
KEGG Orthology (KO) [BR:
aso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aso03019
]
SFBmNL_00017
Messenger RNA biogenesis [BR:
aso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SFBmNL_00017
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AID43958
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All DBs
Position
21023..21991
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AA seq
322 aa
AA seq
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MKGHINIKDFKVGERIQGVYLIRTIHVKLTNSSNKKYLDINFSDKTGNINAKLWDLKDDY
NDEFKENTLVKVKGCILSWQGSMQLKIENLSNDFDKEYINIDDYVQCAPMDSNYMFDELY
NLISGFKQKEIRSVLLAILDIKKDKLLYYPAAKSNHHSIKGGLLYHILSMIKLGESICGL
YPFVNRELLFAGIVLHDIEKTEEMDSNELGIVSTYTVEGQMLSHLIQGITLVDRVCNSLN
ISSEVRMLLQHMILSHHYEAEYGSPIKPMIIEGELLHHIDVIDARMYDMKKIIDNINEGD
LSDRVFSLNSRRIYKPKKLLEE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggcatataaatataaaggattttaaagtaggagaaagaattcaaggagtatat
cttattagaactatacatgtaaaacttacaaactctagtaataaaaaatatttagatatt
aatttttctgataaaactggtaatataaatgctaagctttgggatttaaaagatgattat
aatgatgaatttaaagaaaatactttagttaaagtaaaaggatgcattttgagttggcaa
ggtagtatgcaacttaagattgaaaatttatcaaatgattttgataaagaatatataaat
attgatgattatgttcaatgtgctcctatggattctaattatatgtttgatgagctttat
aatttaatatctggatttaaacaaaaggagataagaagtgttttattagctatactcgat
ataaaaaaggataaacttttatattatccagcagctaaaagtaaccatcattcaataaaa
ggaggattattatatcatattttaagtatgataaagcttggtgagagcatatgtggactt
tatccttttgttaatagagaattactatttgcgggaatagtgcttcatgatattgagaaa
actgaagaaatggattcaaatgaattaggtatagtaagtacatatacagtggaaggtcaa
atgctttcacatttaatacaaggtataactcttgttgatagggtttgcaatagtttaaac
atatctagtgaagttaggatgttacttcagcatatgatattgtctcatcattatgaggct
gaatatggaagtccaataaagccaatgataattgaaggggaacttcttcatcatatagat
gttatagatgcaagaatgtatgatatgaaaaagattatagataatataaatgagggagat
ttgtcagatagagtattctctttaaatagcaggagaatatataaacctaagaaattatta
gaggagtag
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