Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_00086
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Entry
SFBmNL_00086 CDS
T03243
Symbol
uvrB
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aso
Candidatus Arthromitus sp. SFB-mouse-NL
Pathway
aso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SFBmNL_00086 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aso03400
]
SFBmNL_00086 (uvrB)
DNA repair and recombination proteins [BR:
aso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SFBmNL_00086 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SFBmNL_00086 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Niban2
Kinesin
Microtub_bd
AAA_22
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
AID44017
LinkDB
All DBs
Position
87548..89530
Genome browser
AA seq
660 aa
AA seq
DB search
MKDFKINSKLKPMGDQPKAIDELVNSINSGNKYQTLLGVTGSGKTFTMANVIERLQRPAL
VLAHNKILAAQLCSEFREFFPDNSVEYFVSYYDYYQPEAYVPQTDTLIEKDASINQEIDK
LRHSATSSLVERRDTIVVASVSCIYGLGNPIEYKKLVVNLRVGMIRDRDDIVRQLVEIQY
ERNEIDFARGTFRVKGDVLDIVPASSFSVGIRVEFFGDEIEKISEFDVLTGKVFSKLAHI
SIYPATHFATSKGVIEEAISEINLELEERIRYFKENDKLLEAQRIKERVNYDIEMMREIG
YCSGIENYSRILDGREKGSKPYTLFDYFPSDYLLFIDESHVTIPQVRAMYAGDRSRKESL
VNYGFRLPCAYDNRPLKFEEFEEKINQVVFVSATPSDYEKEHQEFIVNQIIRPTGLLDPL
VEVRPIENQIDDLYEEVIKTIEKGFRVLVTTLTKKMAEHLTDYLNDLNIKTTYMHSDVKT
IDRMEIIKSLRSGEFDVLVGINLLREGLDIPEVSLVCILDADKEGFLRSETSLIQTIGRA
ARNAESKVILYGDVITKSMKMAIDETKRRRAIQMEHNKKYGITPKTVIKGIREVIQATKI
SNDEVSKKKVNINIPKDFDECMKRIGMLEKEMKKCAKELDFERAMELRDEIKEIKKIIFI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattttaagataaattcaaagttaaaacccatgggagatcagcctaaagctata
gatgaacttgtaaattctattaatagtggtaataaataccaaactcttttgggtgttact
ggatctggaaaaacttttactatggcaaatgttatagagaggttacagagaccagcttta
gtattggctcataataaaatattagcagcacaattatgttcggagtttagagagtttttt
ccagataattctgttgagtattttgtgtcttattatgattattatcagccagaggcctat
gttcctcaaacggatacattaatagaaaaggatgcatctattaatcaggagatagataaa
ttaaggcactctgcaacatcttctttagttgaaagaagagataccatagttgtggcttct
gtatcttgcatatatggtttaggaaatcctatagagtataagaagcttgtagtaaatcta
agagttggtatgattcgtgatagggatgacattgtaaggcaacttgttgagatacagtat
gagagaaatgagatagattttgctagagggacatttagggttaagggtgatgttcttgat
attgtcccagcatcttctttcagtgttggaattagggttgaattttttggagatgagata
gagaaaataagtgaatttgatgttttgacaggaaaagtattttctaaattagctcatatt
tctatatatccagctactcattttgctacatctaaaggagtgattgaagaagctataagt
gagataaatttggaacttgaagagagaattaggtattttaaagaaaatgataaactcttg
gaagcccagaggattaaagagagagttaattatgatattgagatgatgagagaaatcggg
tattgcagtggtattgagaattattctagaattttagatggaagagagaaggggagcaaa
ccttatactttgtttgattattttccgtctgattatttgttgtttatagatgagtctcat
gttactataccacaagttagagcaatgtatgcgggagatagatcgagaaaggagtccctt
gttaattatggatttagacttccttgtgcttatgataatcgtcctcttaaatttgaagaa
tttgaggaaaagataaatcaagtagtttttgtgtctgcaacaccatcagattatgaaaaa
gagcatcaagaatttatagtaaatcaaattataagaccaacgggacttttagatcctttg
gttgaggttagacccattgaaaatcagatagatgatttatatgaggaagttataaaaacg
atagaaaagggatttagagttttagttacaactctcacaaaaaagatggcggagcattta
actgattatttaaatgatttaaacattaaaactacatatatgcattctgatgtaaagact
atagatagaatggagataataaaatctttaagaagtggggaatttgatgttttagttggt
ataaatttattgagagagggacttgatatacctgaagtatctcttgtgtgtattcttgat
gctgataaagagggatttttaagatctgaaacaagtcttatccaaacgataggaagagct
gcaagaaatgcagagagtaaggttatattgtatggtgatgttataactaagtccatgaaa
atggcaattgatgaaacaaagagaagaagagcaatacaaatggaacacaataagaagtat
ggaataactcctaaaactgttataaaaggtatcagagaagtaatacaagcaacgaagata
tcaaatgatgaagttagtaagaagaaggttaatattaatattccaaaagattttgatgag
tgtatgaagcgtattggtatgcttgagaaagaaatgaagaaatgtgcgaaagaacttgat
tttgagcgtgctatggaattgagagatgagataaaagaaattaagaagattatatttatt
tag
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