Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_00232
Help
Entry
SFBmNL_00232 CDS
T03243
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aso
Candidatus Arthromitus sp. SFB-mouse-NL
Pathway
aso00300
Lysine biosynthesis
aso00470
D-Amino acid metabolism
aso01100
Metabolic pathways
aso01110
Biosynthesis of secondary metabolites
aso01120
Microbial metabolism in diverse environments
aso01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
aso00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SFBmNL_00232 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SFBmNL_00232 (dapF)
Enzymes [BR:
aso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SFBmNL_00232 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF6296
Motif
Other DBs
NCBI-ProteinID:
AID44160
LinkDB
All DBs
Position
241837..242670
Genome browser
AA seq
277 aa
AA seq
DB search
MRKIFKYEALGNDYIVIDPRNFDILMSEKNIIKICNRNFGCGSDGILYGPIFKGNDIFLK
IFNPDGSEAEKSGNGIRIFSKYLKDEGYVKDSSFRLQTKGGEVLVRYLNDDGTLIKVSMG
KVSFNSKDIGITGNEREVINENIEVLDKKFKVTSLTIGNPHTVCIFDKLDDESIHKYGPY
IENHEMFINRTNVQFVEVLDRNTIKIKIYERGAGYTLASGSSSCGAVSACYKLSLVDSDV
LVKCDGGDIRVEIDDNGEVSMTGKVSKVYDGILRMDL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatttttaaatatgaagcattaggaaatgattatatagttattgatccaaga
aattttgatatccttatgagtgaaaaaaatataattaaaatttgtaatagaaattttgga
tgtggatctgatggtatattgtatggaccaatttttaagggtaatgatatatttttaaaa
atatttaatcctgatggaagtgaagctgagaaaagtggaaatggaataagaatattttca
aaatatttgaaggatgagggatatgtgaaagatagtagttttaggcttcaaacaaaggga
ggagaagttttagttagatatttaaatgatgatggaactttaataaaggtatctatgggt
aaggtatcatttaattccaaagatattggaattacagggaatgagagggaagttataaat
gagaatatagaggtgttagataagaagtttaaggtaacttctttaactattggaaatcca
catacagtttgcatatttgacaaattagatgatgagagtatacataaatacggtccatat
attgagaatcatgaaatgtttataaatagaactaatgttcaatttgttgaggtattggat
agaaatactatcaaaataaagatatatgaaagaggtgctgggtatacattagcttctgga
tcaagtagttgtggggccgttagtgcttgttataaattatctttagtggattctgatgtt
ttagttaaatgtgatggtggagatattagagttgaaattgatgacaatggggaagtgtct
atgacagggaaggtttctaaagtttatgatggtattcttaggatggatttatga
DBGET
integrated database retrieval system
