KEGG   Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_00636
Entry
SFBmNL_00636      CDS       T03243                                 
Name
(GenBank) Hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
aso  Candidatus Arthromitus sp. SFB-mouse-NL
Pathway
aso03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:aso00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SFBmNL_00636
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aso03021]
    SFBmNL_00636
   03400 DNA repair and recombination proteins [BR:aso03400]
    SFBmNL_00636
Enzymes [BR:aso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SFBmNL_00636
Transcription machinery [BR:aso03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SFBmNL_00636
DNA repair and recombination proteins [BR:aso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SFBmNL_00636
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF559
Other DBs
NCBI-ProteinID: AID44544
LinkDB
Position
641107..641319
AA seq 70 aa
MKDSIVYPSISELMKKVDNKFSLVILSAKVARHNIDKDKDVKRDKHINYLTQSVLDIYND
KIDFSTIDSE
NT seq 213 nt   +upstreamnt  +downstreamnt
atgaaagattctattgtttacccatctataagtgaacttatgaagaaagtagacaataaa
ttttcacttgttatactttctgcaaaagttgcgaggcataatatagataaagataaggat
gtaaaaagagataaacacattaattatttaactcaatctgttcttgatatttataatgat
aagatagattttagtacaattgattccgaataa

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