Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_00784
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Entry
SFBmNL_00784 CDS
T03243
Symbol
pnpA
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aso
Candidatus Arthromitus sp. SFB-mouse-NL
Pathway
aso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFBmNL_00784 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aso03019
]
SFBmNL_00784 (pnpA)
03016 Transfer RNA biogenesis [BR:
aso03016
]
SFBmNL_00784 (pnpA)
Enzymes [BR:
aso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SFBmNL_00784 (pnpA)
Messenger RNA biogenesis [BR:
aso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SFBmNL_00784 (pnpA)
Transfer RNA biogenesis [BR:
aso03016
]
Prokaryotic type
tRNA degradation factors
SFBmNL_00784 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
S1_RRP5
KH_1
S1_2
Cap4_nuclease
Mug135_C
Motif
Other DBs
NCBI-ProteinID:
AID44692
LinkDB
All DBs
Position
786274..788388
Genome browser
AA seq
704 aa
AA seq
DB search
MLDILETVFEGRKLSLKLGDLGMLSNTSIIVSYGDTCVLVNVNASEKPREGIDFFPLSVE
YEERLYSVGKIPGGFIKREGKPSTQAILNGRAIDRPLRPLFPKGYRNDVQVVCTVMSVEN
DNLPEILAINASSLALCISNIPYTEPVGAVMVGLVHGEFVINPTSKQREETILNLTVCAT
RERVIMIEAGGCEIPEDIMYDAIKFGFDACQKLIKFQLDAVEKYGKDKIEPELYSVSDDI
AEEVHKFCYDKIKSVMYTTDKIERAEVMGDLKNEISDHFKEIYPDNMLDVNYIVNNIQKE
IVRKMILDENRRPDGRDFDEIRPISCDISILPRTHGTGLFTRGLTQVLTIATLGPLADVQ
IIDGIGEEEYKRYMHHYNFPSYSVGEVKPLRGPGRREIGHGALAEKALEPLIPPTEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPIKRPAAGIAIGLFTNDDLTREEILTDI
QGVEDFFGDMDFKVAGTEKGITAIQVDTKIRGLSWDCIKKSLESARKARLEILDKINKCI
PKHKSSLSEYAPKTKIIKIDPDKIRDVIGIGGKVINKIISDANLKKQAIHIEDDGRIFIS
DYDVNKIDYALNQIEIITKEIKVGEVYLGKVVKITSFGAFVDIFNGKEGLVHISKLSNKK
FNKVEDTVSVGDEILVKVIDIDSHGRINLSRKDILDNKQEQKDN
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacattttagagactgtatttgaaggtagaaagttgtcccttaaactcggtgat
ttgggtatgttatcaaatacgtcgattattgttagttacggagatacatgtgttctcgta
aatgttaatgcttctgaaaaaccaagggaaggaatagatttttttccactaagtgttgaa
tatgaggagagattatattctgttggtaaaattccaggaggatttataaaaagagaggga
aaaccatccactcaagctatattgaatgggagagctattgatagaccattaaggccatta
tttcctaaggggtacagaaatgatgttcaagtagtttgtacagtaatgtctgtagaaaat
gataatttaccagaaattttagctattaatgcatcctcattagcattgtgtatatctaat
attccttacactgaacctgttggagcagtcatggtaggattagttcatggagagtttgta
ataaaccctacatctaaacaaagagaagaaactatattaaatttaacagtatgtgcaact
agagaaagagtgataatgattgaagctggcggttgtgaaataccagaagatattatgtat
gatgcaataaagtttggatttgatgcttgtcagaaattaattaaatttcaactagatgcc
gttgaaaaatatggtaaggataaaattgaaccagagctttattcagtttctgatgatata
gctgaggaagtacataaattttgttatgataaaattaagagtgtcatgtatacgactgat
aagattgaacgagcagaggtaatgggtgaccttaaaaatgaaattagtgatcattttaaa
gaaatatatccagataatatgttagatgtaaactacattgttaataatattcaaaaagaa
attgttagaaaaatgatattggatgaaaataggagacctgatggtagagattttgatgaa
ataaggcctatatcatgtgatatatccatacttcctagaactcacgggacaggattattt
acgaggggactcacccaggtattaactatagcaactcttggaccacttgctgatgttcaa
attattgatggaattggtgaagaagagtataagagatatatgcatcattataattttcca
tcatatagcgttggagaagttaagccactcagaggacctggaagacgtgagataggacat
ggagctttagcagaaaaagcccttgagccattaatacctccaacagaagaatttccatac
acaatacgattagtatcagaagttttaagttcgaatggttcaacatctcaagcatctgtt
tgtggaagtacacttgcattacttgatgcaggagttcctataaaaagaccagcagcaggt
attgcgattggattatttactaatgatgatttaactagagaggaaattttaactgatata
caaggtgtagaggatttttttggagatatggattttaaagttgctgggacagaaaaagga
ataacagcaattcaagttgatacaaagataagaggattgtcttgggattgtattaaaaag
agtttagaatctgctaggaaggctaggcttgaaattttagataaaataaataaatgtatt
ccaaaacataaatccagtttatctgagtatgctcctaaaacaaagattataaaaattgat
ccagataagataagggatgtaataggtattggcggtaaagttataaataaaattatctct
gacgctaatcttaaaaagcaagctatacatatagaagatgatggacgtatatttatatct
gattatgatgttaacaaaattgattatgcattaaaccaaatagagattattacaaaagag
attaaagttggggaagtttatcttggaaaggttgttaagataacaagttttggtgctttt
gtagatatttttaatggtaaagaaggattagttcatatttctaagctttctaataaaaag
tttaataaagttgaggatactgtttcagttggtgatgaaatactggttaaggtaattgat
attgattcacatggaagaattaatttatctaggaaagatattttagataacaaacaagaa
caaaaagataattga
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