Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_01210
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Entry
SFBmNL_01210 CDS
T03243
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
aso
Candidatus Arthromitus sp. SFB-mouse-NL
Brite
KEGG Orthology (KO) [BR:
aso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aso03400
]
SFBmNL_01210 (sbcD)
DNA repair and recombination proteins [BR:
aso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SFBmNL_01210 (sbcD)
Archaeal homologous recombinant proteins
SFBmNL_01210 (sbcD)
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
CTP_transf_like
SBP56
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-ProteinID:
AID45114
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Position
complement(1223608..1224768)
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AA seq
386 aa
AA seq
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MKILHTSDWHIGKKVNDFNMLDDQRYVLDQICNIIKREKIDVVIIAGDLYDKAIVDTHAI
KLLNDVLVKIVNECGAKVILIAGNHDSADRISFVKEFLVNSGIYIEGKFEGKVSKISLKD
VFGDVNFYPISYFDEVHIKHLFNDSSIKTSNDALIRIIEGMDVDYSKRNIFIAHGYFSNK
DGDKMIESDSERRLSIGGQDVMDASILKNFDYVALGHLHANQKVILDHIRYSGSIVKYSF
SEMNHKKSVTIVDLGDKGDVRINQVELRLKHDMREIEGYIDTITSEEFYKNYNLDDYFRI
ILHDSIGVRDPATRIRKIYKNFMEIKFRDSSFGDGNDEEISNSDIILKSPFELFEMFYKS
MTDKELNHVQRDILKDVIKKVNILDE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattacatacttcagattggcatattgggaaaaaggtcaatgattttaatatg
cttgatgaccaaagatatgttttagatcaaatttgtaacattataaagagagaaaaaatt
gatgttgtaattattgcaggagatttgtatgataaagccattgtagatacacatgctata
aaacttttaaatgatgtattggttaaaatagtgaatgaatgtggagctaaagtgattttg
atagcgggaaatcatgatagtgcagatagaatatcttttgttaaggaatttttagttaat
tcaggaatttatatagaaggaaaatttgagggtaaggttagcaaaatatctttaaaggat
gtgtttggagatgttaacttttatcctatttcatattttgatgaggttcatataaagcac
ttatttaatgattcttcaattaagacatctaatgatgctttaattaggataatagaaggt
atggatgttgattacagcaagaggaatatatttatagctcatggatatttttctaataaa
gatggagataagatgattgaaagtgattccgaaagaagattatcgataggtggacaagat
gttatggatgcatctatacttaaaaattttgattatgtagcacttggacatcttcatgca
aatcaaaaagttattttggatcatataaggtattcaggttctatagtgaagtattcattt
tcagagatgaatcataaaaagagtgtaacaattgttgacttgggagataaaggtgatgtt
agaataaatcaagttgaacttagacttaaacatgacatgagagaaatagaaggatatatt
gatactataacgagtgaagaattttataagaattataatcttgatgattactttagaata
attcttcatgattctattggggttagagatcccgcaactagaattagaaagatttataaa
aattttatggagattaaatttagagatagtagttttggtgatgggaatgatgaggagata
agtaattcagatattatattaaaatctccttttgaattattcgaaatgttttataagagc
atgacagataaggaactcaatcatgttcaaagagatattttgaaagatgttataaagaaa
gtaaatatcttagatgaataa
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