Candidatus Arthromitus sp. SFB-mouse-NL: SFBmNL_01440
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Entry
SFBmNL_01440 CDS
T03243
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aso
Candidatus Arthromitus sp. SFB-mouse-NL
Pathway
aso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SFBmNL_01440 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aso03021
]
SFBmNL_01440 (rpoA)
03400 DNA repair and recombination proteins [BR:
aso03400
]
SFBmNL_01440 (rpoA)
Enzymes [BR:
aso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SFBmNL_01440 (rpoA)
Transcription machinery [BR:
aso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SFBmNL_01440 (rpoA)
DNA repair and recombination proteins [BR:
aso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SFBmNL_01440 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
RAD51D_N
SAM_EPH
Cytomega_gL
Motif
Other DBs
NCBI-ProteinID:
AID45339
LinkDB
All DBs
Position
complement(1480673..1481617)
Genome browser
AA seq
314 aa
AA seq
DB search
MFDIETPKIECIESNEQGTYGKYVIDPLERGYGTTLGNSLRRILLSSLPGVATTSIKINE
VLHEFSTIKGIKEDVTEIILNIKQLALRMEEEGSKVLHLDIKGSKEVTAADIIEEEGIEI
INKDLHIATLEDDGHLNMEITVNRGRGYVPQNKNKIDGNIGYIPIDSIYTPVKRVNFTVE
NTRVGQVTDYDKLTIEVWTNGSIKVDEAISYSAKILIEHFKLFLGLTKEANEVVVMVQKE
EDKKEKVLEMTIEELDFSVRSYNCLKRAGINTVQELAQKSLEDMMKVRNLGKKSLEEVEK
KLKDLGLSLKQSDE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatattgaaacacctaagattgaatgtatagaatctaatgaacaagggacatat
gggaaatatgttatagatcctcttgaaagagggtatggaacaactcttggcaattcatta
agaagaattttgctatcatcactacctggtgtagctactacttctataaaaattaacgaa
gtattacatgaattttctacaattaagggtataaaagaagatgtaacagaaattattttg
aatattaagcaacttgctttaaggatggaagaagaaggaagtaaagtattacatttagat
attaagggaagcaaggaagttactgctgcagatataattgaagaagaaggaattgaaatt
ataaataaagatttacatatagcaacacttgaagatgatgggcatttaaatatggagata
actgttaatagaggaagagggtatgtcccccaaaataagaataaaatagatgggaatatt
ggatatataccgattgattctatttatactccagtgaagagggttaattttaccgttgag
aatactagagtggggcaagttactgattatgataaattaactatagaagtatggactaat
ggttctataaaagtagatgaggcaataagttattcggctaaaatattaattgaacatttt
aaattatttttaggtttaactaaagaggcaaatgaagttgttgtaatggtacaaaaagaa
gaagataaaaaagagaaagtacttgagatgactattgaagagttagatttttctgttagg
agttataactgtttaaagagggcaggtataaatacagtacaagaacttgcacaaaaatct
ttagaagatatgatgaaagttagaaatttaggcaagaaatctttagaagaagttgaaaag
aaacttaaggatttgggattaagtttaaaacaaagtgatgaataa
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