Aneurinibacillus soli: CB4_00159
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Entry
CB4_00159 CDS
T05174
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
asoc
Aneurinibacillus soli
Pathway
asoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CB4_00159 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asoc03019
]
CB4_00159 (recQ_1)
03400 DNA repair and recombination proteins [BR:
asoc03400
]
CB4_00159 (recQ_1)
Enzymes [BR:
asoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CB4_00159 (recQ_1)
Messenger RNA biogenesis [BR:
asoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CB4_00159 (recQ_1)
DNA repair and recombination proteins [BR:
asoc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CB4_00159 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
BAU26070
UniProt:
A0A0U5B327
LinkDB
All DBs
Position
complement(140940..142721)
Genome browser
AA seq
593 aa
AA seq
DB search
MFREAEKQLQRYYGYASFRNGQQEIVTSLLARQDTLGIMPTGGGKSVCYQIPALLFPGLT
LVISPLIALMKDQVDALASMGIQASFINSSLSGSEVSARMRAARLGEYKLLYIAPERLEA
PGFRAMILDMPVSFLAIDEAHCMSQWGHDFRPSYRAIADWVAEMPERPLIGAFTATATQE
VREDIIRLLALRNPNVYISGFDRDNLTFLVRKGENKQDFILSYIKVNKGQSGIIYAATRR
EVDGLHALLVRKGITAGRYHAGLSDTERSEMQERFLHDDLEVMVASNAFGMGINKSNVRY
VIHHNMPKNIEAYYQEAGRAGRDGEPGECVLLFGPQDVQTQRFFIEQSELPPERKENEYR
KLQAMVDYCHTTHCLRQHLLQYFGEAAPAACGACSSCTDEAEMVDSTVDAQKIFSCIYRM
RERFGAAMVAGVLKGSRSKKVLDTGFNSLPTYGIMANYTEKQIVDLIHLFTAEGYLALSE
GKYPVLSLLPKSWAVLKNGEQVLRKVRVEKQKAAPDDALFEQLRAVRKEIAQREGIPPYI
VFSDRTLREMSELRPADEEEMHRVKGMGDVKFERYGLIFLEAIQKYVGAQTVQ
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtttagagaagcggaaaagcagctccaacgctattacggatatgcttcctttcgcaac
ggacagcaagaaattgtaacaagcctgcttgctagacaagatacgcttggcatcatgcca
acaggcggcggaaaatccgtctgttaccaaattccagcgttattgtttccggggttgaca
ctcgttatctccccgcttatcgccctgatgaaagatcaggtcgatgcgcttgctagtatg
ggcattcaggcaagcttcatcaatagctccctgtccggctccgaagtgagtgctcggatg
cgggcggcacggttgggagagtataagctgttatacatcgcaccggagcgtctggaagca
ccaggcttccgagcgatgattctcgacatgccagtctcgttcctcgccatcgacgaagcg
cattgcatgtcgcagtgggggcacgacttccgtccaagctaccgtgcgattgcggactgg
gttgcagagatgcctgagcgcccactgatcggggcttttaccgcgaccgccacgcaggaa
gtacgggaggatattattcgcctgctcgcccttcgcaatccgaatgtgtatatatccggg
tttgaccgggacaaccttacctttttggtgcggaagggagagaataagcaggatttcatt
ctttcctatataaaagtgaacaaggggcaatctggcatcatctatgcggcgacacggcgg
gaagtggacgggctgcatgccttgcttgtgcggaagggaattacggcggggcgttatcat
gcgggattatccgatacagagcgtagcgagatgcaggagcggttcctgcatgacgatctg
gaagtgatggtggcaagcaatgcgtttgggatgggaattaacaagtcgaacgtgcgctat
gttattcatcacaatatgcccaaaaatatcgaagcatactaccaggaagcaggccgagcg
ggtcgggacggagaaccgggggagtgtgtcctgctatttggtccccaagatgtgcagaca
cagcgcttcttcatcgaacagagtgaattgccacctgagcggaaagagaatgaatatcgt
aagttgcaggcgatggtcgattactgccatacgacacactgcttgcgtcagcatctgttg
caatattttggtgaagcggctccagctgcgtgtggggcatgtagcagctgtacggacgaa
gcggaaatggtggacagtacggtggacgcgcagaagatcttctcctgcatctaccgcatg
cgggagcgatttggtgcggcgatggtagcaggggtgctgaagggttcacggagcaaaaaa
gtgctcgatacgggatttaacagcttaccaacttacgggattatggcgaattatacggaa
aagcagattgtcgatctcattcatctattcacagcagaaggatatcttgccttatcagaa
ggcaagtatcccgtacttagccttctgcccaaatcgtgggcggttcttaagaacggggag
caggtactgcggaaggtccgggtagagaagcagaaagcagcacctgatgatgcattattc
gagcagctgcgtgcggtgcgtaaggaaattgcccagcgggaaggcattccgccgtatatc
gtgttctcagatcgcactctgcgtgagatgagtgagttgcgcccggccgatgaagaagag
atgcaccgggtgaaagggatgggagatgttaagtttgaacggtacggcctcatttttctg
gaagccatccagaaatacgtgggcgcacagacggttcagtaa
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