Aneurinibacillus soli: CB4_00229
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Entry
CB4_00229 CDS
T05174
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
asoc
Aneurinibacillus soli
Pathway
asoc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
asoc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CB4_00229 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asoc03021
]
CB4_00229 (rpoC)
03400 DNA repair and recombination proteins [BR:
asoc03400
]
CB4_00229 (rpoC)
Enzymes [BR:
asoc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CB4_00229 (rpoC)
Transcription machinery [BR:
asoc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CB4_00229 (rpoC)
DNA repair and recombination proteins [BR:
asoc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CB4_00229 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Alpha-2-MRAP_N
AP1AR
Motif
Other DBs
NCBI-ProteinID:
BAU26127
UniProt:
A0A0U5AYV4
LinkDB
All DBs
Position
complement(187796..191437)
Genome browser
AA seq
1213 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVTDAGETPLEKKQLLSEKEYRNYREKYGQAFTAQMGAEAIKKLLA
EIDLDKEVDFLKEELKSAQGQRRNRVIKRLEVLESFRNSGNFPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERVHPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGTYYLTMENKESTGEGKVFSNPNQAIAAYANDHVTLHARIAIP
PTSLGKTSFTPEQINAPLMVTTVGKLIFNEILPPELPYINDPTKYNLQKQVPDKFFIFDK
GTNVKEFLENLPEHEAVKKGYLGTIISECFRRFGTTQTSVILDDIKANGFKFSTQAGITV
AVADIKTPEEKQQILADADAEVEVVQQQFRRGLITDNERYDRVISIWSKAKDRVTKVLMA
SLDKFNAINMMATSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLSVLEYFI
STHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGVEAMAIRDGKEIIED
LYDRLVGRYSFQTLRHPETDEVMVGRNELIDENLADEIIAAGIEKVTIRSVIGCRTHHGV
CKKCYGRNLATGKNVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQE
LFEARNPKGQAVITEIDGEVVDMREGKDRREVEIRGETESKVYQIPYGSRLKVAIGRKVD
IGEELTEGSIDPKEMLKVRGMRGVQYYILQEVQKVYRMQGVEINDKHVEVMIRQMLRKVR
VIDSGETDLLPGAYVEIHEFEEANKKVLWEGRQPAVARSVLLGITKASLETDSFLSAASF
QETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMNRYRNIKLQHDLMPAEETVEQS
LVEEGAGLEEVSK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgtcaataattttgaatatatgaagattggcctcgcatcaccggataaaatt
cgttcctggtcatacggtgaggtcaaaaaaccggaaaccattaactaccggacgttaaag
ccggaaaaagaaggcttgttctgcgagaaaattttcggaccgacaaaggactgggaatgt
cactgcggaaagtacaagcgtgtacgttataaaggcgtcgtctgcgaccgttgcggcgtt
gaagtgacgcgcgccaaagtacgtcgggagcgtatggggcacatcgaacttgctgcccct
gtctctcacatctggtatttcaaaggaattccgagccgtatgggccttgtgctcgatatg
tctccacgttccctcgaagaagtaatctacttcgcatcatacgttgtaaccgatgcaggg
gagacaccgcttgagaagaagcaacttctttctgagaaagaataccgcaactaccgtgag
aaatacggccaggcattcaccgctcagatgggtgcagaagcgatcaagaagcttctggct
gagattgatcttgataaagaagtagattttttgaaagaagagttgaaatcagcacaggga
cagcgtcgcaaccgtgtgatcaaacgtctcgaagtgctggagtccttccgtaattccggg
aacttcccggattggatggtacttgatgtactgccggttatcccgccggaactgcgcccg
atggttcagcttgatggtggacgttttgcaacgtctgacttgaacgacctgtaccgtcgt
gtaatcaaccggaacaaccgtcttaagcgtctgcttgatctcggcgctccagatatcatc
gtacaaaatgaaaagcgtatgctacaggaagcagtagatgcgctgattgataacggtcgc
cgtggccgtccggtaacaggaccgggtaaccgtccgctgaaatctctcagccatatgctg
aaaggtaagcagggtcgtttccgtcagaacttgctcggtaagcgtgttgactactctggt
cgttcggttatcgtagtaggtccgcacctcaaaatgtaccagtgcggtctgccgaaagaa
atggcacttgagctgtttaagccattcgtaatgaaagagcttgtcagcaaaggactcgca
cacaatatcaaatcagcgaagcgcaaagtagagcgcgtgcatccggaagtatgggatgtt
ctcgaggacgttatccgtgaacacccggttcttctcaaccgtgcccctacgcttcaccgt
cttggtattcaggcgttcgaaccaacacttgttgaaggacgtgcgatccgtctccacccg
cttgtatgtacagcgtacaacgctgacttcgatggtgaccagatggcggtacacgtgccg
ctctcagcagaagcacaggcagaagctcgtcttcttatgctggcagcacagaacatcctg
aacccgaaagacggtaagccagttgttacaccatctcaggatatggtactaggtacgtac
tatctgacgatggaaaataaagaatcaacaggtgaggggaaagtattctctaacccgaat
caggcgatcgctgcatatgcaaacgaccatgtaacgttgcatgctcgcattgctatacca
ccgacaagcctgggcaaaacatcctttacgccggagcagattaatgcgccgcttatggtt
acaaccgtagggaagctgatctttaatgaaatccttccacctgagctgccatacatcaat
gatccgacgaaatacaatctgcaaaaacaggttccggataagttctttattttcgataaa
ggaacgaacgtgaaggagttccttgaaaatctgccagaacatgaagccgtgaaaaaagga
tatcttggtacaattatttcagaatgtttccgtcgttttggaacgacacaaacatctgtt
attctcgatgacatcaaggcaaatggctttaagttctccacacaagcagggattacggta
gctgttgctgatattaaaacaccggaagagaagcagcagattctggctgatgccgatgca
gaagtagaagttgtgcagcagcagttccgccgtggtctcattacagataatgagcgctat
gaccgtgttattagcatctggagcaaagcgaaagaccgcgttacaaaagtgttgatggcg
tctctcgacaagttcaacgcgatcaacatgatggccacatccggtgcccgcggtaacgta
tcgcagattacacagcttgcaggtatgcgtggtctgatggcgaatccatctggtcgtatc
atcgagttgccaatcaaatcaaacttccgtgaaggtctgtctgtactcgaatacttcatc
tcgacgcacggtgcgcgtaaaggtctcgccgataccgccctgcgtacagctgactcgggt
tacctgacacgccgtctggtagacgttgcacaggacgtaatcgttcgggaagacgactgc
ggtacggataaaggtgtagaggcgatggcaattcgtgacggtaaagagatcattgaagat
ctgtatgaccgtctcgtaggtcgctattcattccagacattacgccatccagagacagat
gaagtcatggtaggccgtaatgagctgatcgatgagaacctagctgatgaaatcattgca
gcaggtatcgaaaaagtaaccattcgttcggttattggctgccgtacgcatcatggtgta
tgtaaaaaatgctatggccgtaacctcgccacaggtaaaaatgtggatgtcggcgaagct
gttggtattattgcagcccagtcgatcggggaaccaggtacacagctgacgatgcgtacc
ttccacaccggtggggttgccggagacgatatcacacagggtcttccgcgtattcaggag
cttttcgaagcgcgtaatcctaaaggtcaggctgtaatcacagagatcgatggggaagtt
gtcgacatgcgtgaaggcaaagaccgtcgtgaagttgaaatccgtggtgaaaccgaaagc
aaagtgtatcaaattccgtatggctcccgcttgaaagtagcaattggccgtaaggttgat
atcggggaagagctgacagaaggttcgattgacccgaaagaaatgctcaaagtccgtggc
atgcgtggcgttcaatactacatcctgcaggaagtacaaaaagtataccgtatgcagggg
gtagaaattaacgacaagcacgttgaggttatgatccgtcagatgctgcgcaaagttcgc
gtcatcgatagcggagaaaccgaccttctgccaggggcatatgtagaaattcatgagttt
gaagaagcgaacaagaaagtgctgtgggaaggcagacagccggctgttgcccgttcagtg
ctgcttggtattacgaaggcttcccttgaaacagattccttcctgtccgcagcttccttc
caggagacgacacgtgtcctgacagatgctgcaattaagggtaaggtagaccgtctcctt
ggtctgaaagagaatgttatcatcggtaaacttgttccagccggtacaggtatgaaccgt
taccgcaacatcaaactgcagcatgatcttatgccagcagaagaaactgttgaacagtct
ctagtagaagaaggagcaggacttgaggaagtatcaaagtaa
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