Aneurinibacillus soli: CB4_00567
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Entry
CB4_00567 CDS
T05174
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
asoc
Aneurinibacillus soli
Pathway
asoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CB4_00567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asoc03021
]
CB4_00567
03019 Messenger RNA biogenesis [BR:
asoc03019
]
CB4_00567
Transcription machinery [BR:
asoc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CB4_00567
Messenger RNA biogenesis [BR:
asoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CB4_00567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
ATPase_2
AAA_22
S1CSD-TOTE-2
AAA
NACHT
AAA_25
Mor
NB-ARC
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
BAU26440
UniProt:
A0A0U4WC87
LinkDB
All DBs
Position
547581..548855
Genome browser
AA seq
424 aa
AA seq
DB search
MEMNLAQLEEKKLTDLYKLAKEFQIPYYGTMKKRELIFAILHAQAERQGHMFMEGVLETH
SDGFGFLRPVNYLPSAEDIYISASQIRRFDLRTGDKVSGKVRPPKENERYFGLLHVEAVN
GEPPETSPERPHFPALTALYPQRNMVLETSPDRVSTRVIDLISPVGFGQRGLIVAPPKAG
KTMLLKEIANSIATNHPHVELIVLLIDERPEEVTDMQRSVKGEVVSSTFDELPENHIKVA
ELVLERAMRLVEHKKDVVILLDSITRLARAYNVTVPASGRTLSGGIDPAAFHRPKRFFGA
ARNVEEGGSLTILATALIETGSRMDDVIYEEFKGTGNMELHLDRKLAERRVYPAIDIRRS
GTRREELLFTKDNLEKVWALRKSIHDNNEFTEAFIKRLNDSKTNQEFLDAIPLEAAKKTV
TRTR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaatttagcgcaactggaagaaaagaaattgaccgacttgtataagcttgca
aaagaatttcagattccgtattacggaacgatgaaaaaacgcgagcttatctttgccatc
ctgcacgcacaggcggagcgtcaaggacacatgtttatggaaggggtgctggagacgcat
tcggatggatttggttttctccgtccggtgaactatctcccaagtgcggaagatatctac
atctcggcatcccagattcgccgctttgaccttcgtaccggagataaagtatccggtaag
gtacgtccaccgaaagaaaatgagcgttattttggcttgttacatgtagaggccgttaac
ggtgaaccaccggaaacatcaccggagcgcccgcattttccggcgctgacggcgctgtat
ccgcagcggaatatggtgcttgaaacgtcgccggatcgtgtgtcgacccgtgtgattgat
ttgatctctcctgtcggttttggccagcgtggcctgatcgtggctccgccaaaagcgggg
aaaaccatgttactgaaagaaattgcgaatagcattgccacaaaccatcctcatgtcgag
ttgattgtgttgttaattgacgagcgccctgaggaagtaacggatatgcagcgatcggtc
aaaggcgaagtcgtcagctctacctttgatgaactcccggagaaccacattaaagtagcg
gaacttgtacttgagcgtgcgatgcgcctcgttgagcataaaaaggatgtcgtcatcctg
cttgacagcattacacgcttggcacgtgcgtacaatgtgaccgtgcctgcaagcggtcgt
acgctctcaggcggtatcgatccagctgccttccaccgcccgaaacgcttttttggtgct
gctcgtaacgtggaagagggtggaagcctgaccattctggccacagctttgattgaaacg
ggctcacggatggatgatgtcatctatgaggaattcaaaggaacgggtaacatggagctt
catctcgaccgtaagctggcggaacgccgcgtgtatcctgcgattgacattcgtcgttcc
ggcacacgccgggaagaactcctgtttacgaaagacaatctggagaaagtctgggcgttg
cgtaaatcgattcatgataacaatgaattcacagaagcgttcattaagcgcttgaatgat
agtaagacgaatcaggaattccttgatgcgattccgctggaagcggcaaaaaagaccgta
acgcgaacgcggtaa
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