KEGG   Aneurinibacillus soli: CB4_00567
Entry
CB4_00567         CDS       T05174                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
asoc  Aneurinibacillus soli
Pathway
asoc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asoc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CB4_00567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asoc03021]
    CB4_00567
   03019 Messenger RNA biogenesis [BR:asoc03019]
    CB4_00567
Transcription machinery [BR:asoc03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     CB4_00567
Messenger RNA biogenesis [BR:asoc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     CB4_00567
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB ATPase_2 AAA_22 S1CSD-TOTE-2 AAA NACHT AAA_25 Mor NB-ARC Spore_III_AA
Other DBs
NCBI-ProteinID: BAU26440
UniProt: A0A0U4WC87
LinkDB
Position
547581..548855
AA seq 424 aa
MEMNLAQLEEKKLTDLYKLAKEFQIPYYGTMKKRELIFAILHAQAERQGHMFMEGVLETH
SDGFGFLRPVNYLPSAEDIYISASQIRRFDLRTGDKVSGKVRPPKENERYFGLLHVEAVN
GEPPETSPERPHFPALTALYPQRNMVLETSPDRVSTRVIDLISPVGFGQRGLIVAPPKAG
KTMLLKEIANSIATNHPHVELIVLLIDERPEEVTDMQRSVKGEVVSSTFDELPENHIKVA
ELVLERAMRLVEHKKDVVILLDSITRLARAYNVTVPASGRTLSGGIDPAAFHRPKRFFGA
ARNVEEGGSLTILATALIETGSRMDDVIYEEFKGTGNMELHLDRKLAERRVYPAIDIRRS
GTRREELLFTKDNLEKVWALRKSIHDNNEFTEAFIKRLNDSKTNQEFLDAIPLEAAKKTV
TRTR
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggaaatgaatttagcgcaactggaagaaaagaaattgaccgacttgtataagcttgca
aaagaatttcagattccgtattacggaacgatgaaaaaacgcgagcttatctttgccatc
ctgcacgcacaggcggagcgtcaaggacacatgtttatggaaggggtgctggagacgcat
tcggatggatttggttttctccgtccggtgaactatctcccaagtgcggaagatatctac
atctcggcatcccagattcgccgctttgaccttcgtaccggagataaagtatccggtaag
gtacgtccaccgaaagaaaatgagcgttattttggcttgttacatgtagaggccgttaac
ggtgaaccaccggaaacatcaccggagcgcccgcattttccggcgctgacggcgctgtat
ccgcagcggaatatggtgcttgaaacgtcgccggatcgtgtgtcgacccgtgtgattgat
ttgatctctcctgtcggttttggccagcgtggcctgatcgtggctccgccaaaagcgggg
aaaaccatgttactgaaagaaattgcgaatagcattgccacaaaccatcctcatgtcgag
ttgattgtgttgttaattgacgagcgccctgaggaagtaacggatatgcagcgatcggtc
aaaggcgaagtcgtcagctctacctttgatgaactcccggagaaccacattaaagtagcg
gaacttgtacttgagcgtgcgatgcgcctcgttgagcataaaaaggatgtcgtcatcctg
cttgacagcattacacgcttggcacgtgcgtacaatgtgaccgtgcctgcaagcggtcgt
acgctctcaggcggtatcgatccagctgccttccaccgcccgaaacgcttttttggtgct
gctcgtaacgtggaagagggtggaagcctgaccattctggccacagctttgattgaaacg
ggctcacggatggatgatgtcatctatgaggaattcaaaggaacgggtaacatggagctt
catctcgaccgtaagctggcggaacgccgcgtgtatcctgcgattgacattcgtcgttcc
ggcacacgccgggaagaactcctgtttacgaaagacaatctggagaaagtctgggcgttg
cgtaaatcgattcatgataacaatgaattcacagaagcgttcattaagcgcttgaatgat
agtaagacgaatcaggaattccttgatgcgattccgctggaagcggcaaaaaagaccgta
acgcgaacgcggtaa

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