Aneurinibacillus soli: CB4_03619
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Entry
CB4_03619 CDS
T05174
Symbol
cshA_7
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asoc
Aneurinibacillus soli
Pathway
asoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CB4_03619 (cshA_7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asoc03019
]
CB4_03619 (cshA_7)
03009 Ribosome biogenesis [BR:
asoc03009
]
CB4_03619 (cshA_7)
Enzymes [BR:
asoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CB4_03619 (cshA_7)
Messenger RNA biogenesis [BR:
asoc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CB4_03619 (cshA_7)
Ribosome biogenesis [BR:
asoc03009
]
Prokaryotic type
rRNA helicases
CB4_03619 (cshA_7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
GRP
AAA_22
TylF
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
BAU29419
UniProt:
A0A0U4WM22
LinkDB
All DBs
Position
complement(3538067..3539593)
Genome browser
AA seq
508 aa
AA seq
DB search
MATFNELGLSPQMTRAISEMGFEEATPIQEKTIPLALQGSDIIGQAQTGTGKTAAFGIPV
IERVDPTNPVIQALIMAPTRELAIQVAEEVGRLGSRSGVRVLPVYGGQEISRQIRALKNR
PHIIIGTPGRLLDHIRRKTIRLQNVATVVLDEADEMLDMGFVEDIESILTEIPEERQSLF
FSATMPPQIKRLTEKFLRNPQHVAIQAKEVTVPNISQYYMELQERQKFDVLCRLLDIDSP
ELAIVFGRTKRRVDELNDALNKRGYMAEGIHGDLSQRQRDVAMRKFREGQLEVLVATDVA
ARGLDVSGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGSAVTFVTPRESDHRKIIEKVTK
RQMDRRAIPSMVEAMEGKQRIALDRLVEVMEEGGLNDYQGMAEEVLNTYNSIDLVAAALK
MLTKSTNSDVDIQLTAEAPVRSKKIKRRDSKPFGNGGGNRGRGGDRGGDRGGRSGGDRNR
GGGSGDRNRSGGDRDRRPRTGGKPKQDR
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacatttaatgaattaggtttaagcccccagatgacacgcgccattagcgagatg
ggatttgaggaagcaacaccaatccaggaaaaaacgatcccccttgcactccaaggatct
gacattattggacaagcacaaacaggtacaggtaaaacagcagccttcggaatcccggta
attgaacgggttgatccgacaaatccggtaattcaggcacttattatggcaccaactcgc
gagttggcgattcaggttgcagaagaagtaggcaggcttggttcccgttcgggcgttcgc
gtattgccggtatacggtggacaagagatcagccgccagattcgtgcattgaaaaaccgc
cctcatattattatcggaacaccgggtcgtctgctcgaccatattcgtcggaagaccatt
cgtctgcaaaacgtagcaacagttgtacttgacgaggcagatgaaatgctcgacatgggc
ttcgtagaggatattgaatcgatcctcacggagattccggaagagcgccagagcttgttc
ttctcagcgacaatgccgccgcaaattaagcgcttaacagagaaattcctgcgcaacccg
cagcatgtggcgattcaggcgaaagaagtaactgtgccaaacatttcccagtactacatg
gagctgcaggaacgccagaagttcgacgttctgtgccgtttgctcgacattgattcaccg
gagcttgcgatcgtattcggtcgtacaaagcgccgggttgatgagctcaatgatgcgctt
aacaagcgtggctacatggcagaaggcatccacggtgacctaagtcagcgtcagcgcgac
gtagcgatgcgcaaattccgtgaaggtcagcttgaagtgcttgttgcaacagacgtagcg
gcacgcggtctcgatgtgagcggcgtaacgcacgtatacaacttcgatattccgcaggac
ccggagagttatgtacaccgtatcggtcgtactggacgtgcgggtaaaacaggttccgca
gtaacattcgtaacaccgcgtgaatccgatcatcgtaagatcattgagaaagttacgaag
cgccagatggatcgtcgtgcgattccaagcatggtcgaagcgatggaaggcaagcagcgt
attgctctagaccgtctggtagaagtgatggaagaaggcgggctgaatgattaccagggc
atggcggaagaagtactgaacacgtacaattccattgatctggtagcagccgcgctgaaa
atgctgacaaaaagcacaaacagcgatgtagatattcagctgacagcggaagcgccggtt
cgttcgaaaaaaatcaagcgccgcgacagcaagccattcggtaacggtggtggcaatcgt
ggacgtggtggtgatcgtggcggtgatcgtggcggacgcagtggcggcgatcgtaatcgt
ggcggtggcagtggtgaccgcaatcgtagcggtggtgaccgtgaccgtcgtccgcgcaca
ggcggcaagccgaagcaggatcgatag
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