Agromyces soli: MTP13_05065
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Entry
MTP13_05065 CDS
T08198
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
asoi
Agromyces soli
Brite
KEGG Orthology (KO) [BR:
asoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asoi03032
]
MTP13_05065
03400 DNA repair and recombination proteins [BR:
asoi03400
]
MTP13_05065
Enzymes [BR:
asoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MTP13_05065
DNA replication proteins [BR:
asoi03032
]
Prokaryotic type
DNA Topoisomerases
MTP13_05065
DNA repair and recombination proteins [BR:
asoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MTP13_05065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UOE27156
LinkDB
All DBs
Position
1064591..1065586
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AA seq
331 aa
AA seq
DB search
MPRLRRVQPYVSPGYQRRRRGSGFEYRHADGGLAGRAERRRIEELAIPPAWTEVWIAEAP
NAHILAVGVDAAGRRQYRYHPAWRERQDAEKFERMSELARVLPDARRSVRRQLAAEGRGR
ERALAAAFRTLDLGALRVGGEEYLLAARTRGLTTLLMRNASVEGELVRLRFRAKGGALHR
IELADAGLVGFVESGADARPSSRLFSWRADAATRAALRAITASEVNDDIRERTGGDFTAK
DFRTLRGTLAAAEHLAAEGPLGTKRARSAAIRGAYVAASEVLHNTPTIAKSSYVDPRVVR
AYESGFVLATSRRPEAALVPLLEEERVGEAG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgcggctgcgccgggtgcagccgtacgtgtcgcccggctatcagcggcggcgccgc
ggctccgggttcgagtaccggcatgccgacggcgggctcgccggtcgcgccgagcggcgg
cgcatcgaggagctcgcgatcccgccggcatggaccgaggtctggatcgcggaggccccg
aacgcgcacatcctcgcggtcggggtcgacgcggcgggacgccggcagtaccgctaccac
ccggcctggcgggagcggcaggacgccgagaagttcgagcggatgtcggagctcgcccgg
gtgctgcccgacgcccgccgctcggtgcgtcggcagctcgcggcggaggggcgcgggcgg
gagcgcgcgctcgcggcggccttccgcacgctcgatctcggggcgctccgcgtgggtggc
gaggagtacctgctcgcggcccgcacgcgcggcctgacgacgctgctcatgcgcaacgcg
agcgtcgagggggagctcgttcggctgcggttccgggcgaagggcggagcactgcaccgg
atcgagctcgccgacgcgggcctcgtcggcttcgtcgaatccggagcggacgcccggccc
agctcgcggctcttcagctggcgggcggacgcggcgactcgggcggcgctgcgggccatc
acggcgagcgaggtgaacgacgacatccgcgagcgcacgggcggcgacttcaccgccaag
gacttccgcacgctgcgcggcacgctcgccgccgccgagcacctggccgccgaggggccg
ctcggcacgaagcgggcgcggagcgcggcgatccggggcgcgtacgtcgcggcatccgag
gtgctgcacaacacccccacgatcgcgaagtcgagctatgtcgacccgcgcgtcgtgcgc
gcctacgagtccggcttcgtgctcgcgacgagccgacgccccgaggcggcgctcgtcccc
ctcctcgaggaggagcgcgtcggcgaggcggggtga
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