Agromyces soli: MTP13_10180
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Entry
MTP13_10180 CDS
T08198
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
asoi
Agromyces soli
Pathway
asoi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asoi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MTP13_10180
09124 Replication and repair
03420 Nucleotide excision repair
MTP13_10180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asoi03021
]
MTP13_10180
03400 DNA repair and recombination proteins [BR:
asoi03400
]
MTP13_10180
Enzymes [BR:
asoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTP13_10180
Transcription machinery [BR:
asoi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MTP13_10180
DNA repair and recombination proteins [BR:
asoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MTP13_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
UOE24738
LinkDB
All DBs
Position
complement(2110670..2112316)
Genome browser
AA seq
548 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVANPLAEDARHDLAVFAELERAPEHIHTYRITRLGLWNARAAG
HTADDMLGTLERYAKFPVPQTVSVDMRETVGRYGRLVIDRTDGGELRLRSDDLAVLTEVV
GAKRIAPLIGERIDDTSFLVEPWARGQLKQELVKLGWPAEDLAGYTPGTPHVIDLAENGW
HLRDYQQKAVDNFFDGGSGVVVLPCGAGKTLVGAGAMATAKTTTLILVTNTVSARQWRDE
LLRRTSLTAEEIGEYSGQTKEIKPVTIATYQILTAKRKGEYAHLSLLDALDWGLIVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AACYEVRIDLPQSERLAYAASADDERYRLAATAPAKLGVVKQLVERHAGERILVIGQYLD
QIDELAETLGAPQLTGATPVDERERLFQEFRDGRTPVLVVSKVANFSVDLPEATVAIQVS
GSYGSRQEEAQRLGRLLRPKESGLSANFYTLVARDTVDQDFAQNRQRFLAEQGYSYTILD
AHALDAAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacggccccctcatcgtgcagagcgaccgcaccgtgctgctcgaggtcgcgaac
ccgctcgccgaggatgcgcggcacgacctcgcagtcttcgcggagctcgagcgcgccccc
gagcacatccacacgtaccgcatcacgaggctcggcctctggaacgcgcgagccgcgggg
cacaccgccgacgacatgctcggcacgctcgagcgctacgcgaagttcccggtgccgcag
accgtctcggtcgacatgcgcgagaccgtcggccggtacggtcggctcgtgatcgatcgc
accgacggcggcgagctgcgcctgcgcagcgacgacctcgcggtgctcaccgaggtcgtc
ggcgcgaagcgcatcgccccgctgatcggcgagcgcatcgacgacacgagcttcctcgtc
gagccctgggcgcgcgggcagctgaagcaggagctcgtgaagctcggctggcccgcggag
gacctcgccggctacacgcccggcaccccgcacgtcatcgacctggccgagaacggctgg
catctgcgcgactaccagcagaaggcggtcgacaacttcttcgacggcggctccggcgtc
gtcgtgctcccctgcggcgccggcaagaccctcgtcggcgccggcgcgatggcgaccgcg
aagaccacgaccctcatcctcgtcacgaacacggtctccgcccgacagtggcgcgacgag
ctgctgcgccgcacgagcctcaccgccgaggagatcggcgagtactcgggccagaccaag
gagatcaagcccgtcacgatcgcgacctaccagatcctcaccgccaagcggaagggcgag
tacgcccacctctcgctgctcgacgcgctcgactggggcctcatcgtgtacgacgaggtg
cacctgctgcccgcgcccgtgttcaagctgacggccgagctgcaggcccgccgccggctc
gggctcaccgcgacgctcgtccgcgaggacggccgcgagggcgacgtcttcagcctgatc
ggcccgaagcgcttcgacgccccgtggaaggagatcgaggcgcagggcttcatctccccc
gccgcctgctacgaggtgcgcatcgatctgccgcagtccgagcggctcgcgtacgcggca
tccgccgacgacgagcgctaccggctcgctgcgaccgcgcccgcgaagctcggcgtcgtg
aagcagctcgtcgagcggcacgccggcgagcgcatcctcgtcatcgggcagtacctcgac
cagatcgacgaactcgccgagacgctcggcgccccgcagctcacgggcgccacgccggtc
gacgagcgcgagcgcctgttccaggagttccgcgacggccgcacgcccgtgctcgtcgtg
tcgaaggtcgcgaacttctccgtcgacctgcccgaggcgaccgtggcgatccaggtgtcc
ggctcgtacggctctcgccaggaggaggcgcagcgcctcggccggctgctgcggcccaag
gagtccgggctctcggcgaacttctacacgctcgtcgcgcgcgacaccgtcgatcaggac
ttcgcccagaaccggcagcgcttcctcgccgagcagggctactcgtacacgatcctcgac
gcgcacgccctcgacgccgccgcctga
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