Agromyces soli: MTP13_16690
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Entry
MTP13_16690 CDS
T08198
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
asoi
Agromyces soli
Pathway
asoi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asoi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTP13_16690 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asoi03021
]
MTP13_16690 (rho)
03019 Messenger RNA biogenesis [BR:
asoi03019
]
MTP13_16690 (rho)
Transcription machinery [BR:
asoi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MTP13_16690 (rho)
Messenger RNA biogenesis [BR:
asoi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MTP13_16690 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
ATPase_2
HeH
Motif
Other DBs
NCBI-ProteinID:
UOE25928
UniProt:
A0ABY4AS26
LinkDB
All DBs
Position
complement(3471439..3473589)
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AA seq
716 aa
AA seq
DB search
MTNGTDRVQNAASTAELKSLKVAELVELAGSLGIAGASKRRKGELIELIEAQQAAGNVEL
DVPTVEADAPAPAEAAPAVATEAPADEAPATEASAASEAPAVEAPAVEASVPAEAPVAEA
PAQTEAPARRGRQSRRVTSSGTAAVQHVNGGGSGVPLVPGDDEAAREAARAAVREELAAA
TGEAGQRPAAAEGESGETPEPRQGRRRGRRGGERNADDKQQNGRGESQADGEKSQGGRNG
DARNERKNDGERKNDGERKNDGERRNDKNDGDKTADGEKQGQGRDKQGQQGGQQTQQQDG
EGGRRSRYRDRKRRGQGGQGDEVEPEILDDDVLIPVAGILDVLDNYAFVRTTGYLPGPSD
VYVSLGQVKKYHLRKGDAVVGAIKQPREGEGSSRQKYNALVKVDSINGQTAEEAAARVDF
QKLTPLYPQDRLRLETEPTKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIS
QNNPEVHLMVVLVDERPEEVTDMERTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVEL
GHDVVVLLDSITRLGRAYNLAAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTIL
ATALVETGSKMDEVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDE
VKITWKLRRALAGLEPQQALEAVLGRLKETQSNTEFLLLMQKSAPVGGHSNESDHR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacggaaccgaccgcgtccagaacgcggccagcaccgcagaactcaagagcctc
aaggtggccgagctcgtcgagctcgccggctccctcggcatcgccggcgcctcgaagcgc
cgcaagggcgagctgatcgagctcatcgaggcccagcaggcagccggcaacgtcgagctc
gacgtgccgaccgtcgaggccgacgcgcccgcccctgccgaggcggcacccgccgtcgcg
accgaggcgcccgccgacgaggccccggcaaccgaggcatccgctgcgtccgaggcgccg
gccgttgaggcgccggccgtcgaagcatctgtcccggccgaggcgcccgtcgccgaggcg
ccggcgcagaccgaggcgcccgcgcgtcgcggccgccagtcgcgtcgcgtgacgagcagc
ggcaccgccgccgtgcagcacgtgaacggcggcggctccggcgttccgctcgtccccggc
gacgacgaggccgcccgtgaggccgcccgcgccgccgtgcgcgaggagctcgcggccgcc
accggcgaggccggccagcgtccggccgccgccgagggcgagtcgggcgagacgcccgag
ccccggcagggccgtcgtcgcggccgccgcggcggcgagcgcaacgccgacgacaagcag
cagaacggccgcggcgagtcgcaggccgacggcgagaagtcgcagggcggtcgcaacggc
gacgcccgcaacgagcgcaagaacgacggcgagcgcaagaacgacggcgagcgcaagaac
gacggcgagcgcaggaacgacaagaacgacggcgacaagaccgccgacggcgagaagcag
ggccagggccgcgacaagcagggccagcagggcggccagcagacccagcagcaggacggc
gagggcggccgtcgcagccgctaccgcgaccgcaagcgccgcggccagggcggccagggt
gacgaggtcgagcccgagatcctcgacgacgacgtgctcatccccgtcgccggcatcctc
gacgtgctcgacaactacgccttcgtgcgcaccacgggctacctgcccggcccgagcgac
gtctacgtctcgctcggacaggtgaagaagtaccacctgcgcaagggcgacgccgtggtc
ggcgccatcaagcagccgcgcgagggcgagggcagcagccgccagaagtacaacgcgctc
gtgaaggtcgactcgatcaacggccagaccgcggaggaggcggcggcccgcgtcgacttc
cagaagctcacgccgctgtacccgcaggaccgcctgcgcctcgagaccgagccgacgaag
ctcacccagcgcatcatcgacctcgtcgccccgatcggcaagggccagcgcggcctcatc
gtcgcgccgccgaaggccggcaagacgatcgtcctgcagcagatcgcgaacgcgatctcg
cagaacaaccccgaggtccacctcatggtcgtgctcgtcgacgagcgccccgaagaggtc
accgacatggagcgcacggtgaagggcgaggtcatcgcctcgaccttcgaccgtcccgcc
gaggaccacaccaccgtcgccgagctcgccatcgagcgcgccaagcgcctggtggagctc
ggccacgacgtcgtcgtgctgctcgactcgatcacccgtctcggccgcgcgtacaacctc
gccgcgccgacctcgggccgcgtgctctccggcggcgtcgacgcctcggcgctgtacccg
ccgaagcgcttcttcggcgccgcgcgcaacatcgagaacggcggctcgctcaccatcctc
gccaccgcgctcgtcgagaccgggtcgaagatggacgaggtcatcttcgaggagttcaag
ggcaccggcaacagcgagctgcgcctcagccgccagctcgccgacaagcgcatcttcccg
gcggtcgacgtgaacgcgtcgtcgacccgtcgcgaggagatgctgctcagccccgacgag
gtgaagatcacctggaagctccgtcgcgcgctcgccggcctcgagccgcagcaggcgctc
gaggccgtcctcgggcggctcaaggagacccagtcgaacaccgagttcctgctcctcatg
cagaagtcggcaccggtcggcgggcactcgaacgagtccgaccaccgctga
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