Acinetobacter soli: BEN76_08105
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Entry
BEN76_08105 CDS
T04684
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K14159
ribonuclease HI / DNA polymerase III subunit epsilon [EC:
3.1.26.4
2.7.7.7
]
Organism
asol
Acinetobacter soli
Pathway
asol03030
DNA replication
asol03430
Mismatch repair
asol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BEN76_08105
03430 Mismatch repair
BEN76_08105
03440 Homologous recombination
BEN76_08105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asol03032
]
BEN76_08105
03400 DNA repair and recombination proteins [BR:
asol03400
]
BEN76_08105
Enzymes [BR:
asol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BEN76_08105
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
BEN76_08105
DNA replication proteins [BR:
asol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BEN76_08105
RNase H
BEN76_08105
DNA repair and recombination proteins [BR:
asol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BEN76_08105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_H
RNase_T
RVT_3
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
APV35979
UniProt:
A0A1P8EIF3
LinkDB
All DBs
Position
1679481..1680815
Genome browser
AA seq
444 aa
AA seq
DB search
MSQTITLYVDGACKGNPGLGGWGAYIITEQGEHKLCGGEPTTTNNRMELTAAIEGIRFCP
PDASLIIWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQALDAICQGRQIEWNWIKGHA
GHAGNEMADTLANQGAAQIAAELHTQSKTTEDTKKKPENDWLLDDPFGFDLDQVEPEENI
EADDESELDNIPSESEQNQVHPFIVVTPAQVHAQGPRQLILDTETTGFYYQDGDRIIEVG
AIEMINRKLTGSSIHIYINPEKPVGDSVNVHGITDEFLADKPKYAEIADVLFEYLKGAEI
IAHNATFDMNFLNMEFTRAGLPALSEVCTVTDTLALAKNKHPGQKNSLDALVRRYEIPAR
DRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSENEQGQSKRARVDFQLPVIQPSEE
ELARHNEWVQGYEEKNGAACLFAK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacaatcaccctttatgttgatggcgcctgtaaaggcaatcccggcttaggt
ggctggggtgcgtatatcattaccgagcaaggtgagcataaactgtgtggtggcgagcca
accaccaccaacaaccgcatggaactgaccgctgcaattgaaggcattcgtttttgtcca
ccagatgccagcttgattatttggaccgattcaaactatgtcaaacaaggcattaccgaa
tggattcatggctggaaaaagaaaaactggaaagacgttaaaaatcctgatctttggcag
gcacttgatgcaatctgtcaaggtcgtcaaattgagtggaactggattaagggtcacgct
ggccacgcaggaaatgaaatggccgatacgctcgcaaaccaaggggcagcccagatcgcc
gctgagcttcacactcaatctaaaaccactgaagacactaaaaaaaaacctgaaaatgac
tggttgctcgatgatccgttcggttttgacctcgatcaggtagaacctgaagagaatatt
gaggcagacgacgagtctgaactggacaacataccgagtgagtccgagcaaaatcaggtt
cacccgtttattgttgtcacgcctgcacaagtgcatgcacaaggcccgcgccagctcatt
ctagataccgaaaccacaggtttttattatcaagatggcgatcgtattatcgaggtcggt
gcgatcgagatgatcaaccgtaaactgacgggcagctcgattcatatttacattaatcca
gaaaagccggtaggcgattcggttaatgtccacgggattaccgacgagtttcttgcagat
aaacccaagtatgccgagattgcggacgtactatttgaatatctgaaaggtgcagagatt
attgcacataacgccaccttcgatatgaacttcctgaatatggagtttacccgtgcagga
ttacctgcattgtctgaggtgtgcacagtcaccgataccttggcactggccaaaaataag
catccggggcaaaaaaactcgctcgatgccttggtcagacgctatgaaattccggcaaga
gaccgtacgttccacggcgcgttactcgatgcggaaattttgtcggatgtctatttggcc
atgaccggtgggcaggtttcatttgatatggatgccctgtcacaaagtgaaaatgagcaa
ggtcagtcaaaacgtgcacgtgtcgattttcagcttccagtgattcaaccctccgaagaa
gaattggcacgtcacaatgaatgggttcagggctacgaagaaaaaaatggggccgcctgc
ttgtttgcaaaataa
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