Alteromonas stellipolaris LMG 21856: AOR13_1203
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Entry
AOR13_1203 CDS
T04153
Name
(GenBank) Metallo-beta-lactamase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
asp
Alteromonas stellipolaris LMG 21856
Pathway
asp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AOR13_1203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asp03019
]
AOR13_1203
Messenger RNA biogenesis [BR:
asp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOR13_1203
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
ALM90246
LinkDB
All DBs
Position
1396595..1397965
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AA seq
456 aa
AA seq
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MITPKKEELWFLPLGGTGEIGMNLNLYGHDGKWLMVDCGVSFDEPLIPPYRYTGTKKQTH
HRVVAPDPAFIAAQKENIAGIVITHAHEDHVGALPYLWARFQCPIYTTSFTAEVLRRKLA
QTKLANKVPIVEIASEQTLTLGPFDVSWLSVTHSLPEPYALKIATSAGTVLHTADWKIDA
QPITGKPFDSNTYRALGNENILAMVGDSTNATKPGFSISERNCYDGLLSTVKPLQGRVVV
TCFGSNIARLITLARVAQKTGRYVALYGRSLINMYSIARQQGIWPVDLPVADAFHLGYLP
PNEVLGVATGSQGEKNTALSRMANDSHPHLQLDKGDTVIYSAIAIPGNEDSIKRVNNVLS
ARGVKVIMSEESQLPIHASGHPCAEELKLMYHWVKPQIAIPVHGEEVHLKAHAMIAKECG
VKKHYVGQNGDLYRLAPQPSIRRQVINTGRVPVQQD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgataacgccgaaaaaagaggagctttggtttttgccattagggggaactggggaaata
ggcatgaacctgaacctgtatgggcatgacggcaaatggttaatggtagattgtggagtg
tcgttcgatgaaccgcttattcctccttatcgctatactggtacaaaaaagcaaacccat
cacagggtagttgcgccagatcccgctttcattgcggcgcaaaaagagaatattgccggc
attgttatcactcatgcgcatgaagatcatgtaggcgcattaccgtatttatgggcacgt
tttcagtgccccatctataccacttcttttactgccgaagtattacgccgtaaacttgcg
caaaccaaattagccaacaaagtacctatagtagagatagcctctgagcaaacgctgaca
ttagggccctttgatgtaagctggttatcagtaacccattcgctgcccgaaccttatgcg
ttaaaaatagccacgtcagcgggcacggttttacatactgccgactggaaaattgacgcg
cagccaattaccggtaagccttttgacagtaatacctatcgcgcattggggaacgaaaac
attcttgccatggttggagattcaaccaacgcgacaaaaccaggtttctccatctctgaa
cgcaattgctacgacggtttgttgagcacagttaaaccactgcagggcagagtcgtcgtt
acctgttttggtagtaatatcgcgcgattaattaccctagctagggtggcccaaaaaacc
gggcgttacgttgctctatacgggcgctctcttatcaatatgtacagcattgcccgccaa
caaggaatctggcctgtagacttgccagtggcagatgcgtttcatttaggctacttgcca
ccaaatgaagtgctcggtgtggcaacaggcagtcagggggagaaaaataccgccctttct
agaatggccaacgacagtcaccctcatttacaattagacaaaggcgataccgttatttat
tccgctattgcaataccgggtaacgaagacagcattaagcgagtaaataatgtgcttagt
gctagaggcgtaaaagtaatcatgagtgaagagagtcagctgcctattcatgcaagtggt
cacccatgcgccgaagaactcaaactcatgtaccattgggtgaagccacaaattgctatt
cctgtgcatggcgaagaggtgcaccttaaagctcatgcgatgattgccaaagaatgtggt
gtaaaaaaacactacgtggggcaaaacggtgacttgtatcggttagctcctcaaccaagc
attcgacggcaagttattaatactgggcgagttcctgttcagcaagattaa
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