Alteromonas stellipolaris LMG 21856: AOR13_1890
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Entry
AOR13_1890 CDS
T04153
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asp
Alteromonas stellipolaris LMG 21856
Pathway
asp03030
DNA replication
asp03430
Mismatch repair
asp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOR13_1890
03430 Mismatch repair
AOR13_1890
03440 Homologous recombination
AOR13_1890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asp03032
]
AOR13_1890
03400 DNA repair and recombination proteins [BR:
asp03400
]
AOR13_1890
Enzymes [BR:
asp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOR13_1890
DNA replication proteins [BR:
asp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOR13_1890
DNA repair and recombination proteins [BR:
asp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOR13_1890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ALM90920
LinkDB
All DBs
Position
complement(2177595..2178317)
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AA seq
240 aa
AA seq
DB search
MRQIVLDTETTGIDPKEGHRVIEIGCVELVNRKLTGNHFHVYINPGRQIEQEAIDVHGIT
NEFLTDKPTFRDVAEDFVNFIRGAQLVIHNAPFDVGFMDHEFGMEPKTRGVITKDICSVL
DTLAVARKMHPGQKNNLDALCKRYGIDNSHRELHGALLDAEILADVYLLMTGGQTKLNLA
SKGSGETQSDALRRLNRNGNKLKVIKANADELAQHESRLDIVEKAGGKCLWRPEQEQTDA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagattgtactagatacagaaactacaggtatcgaccctaaagaaggtcaccga
gtgattgaaattgggtgtgttgagctggttaaccgcaaacttactggcaatcactttcat
gtatacattaatcctggccgccaaatagaacaagaggccattgatgttcacggtattacc
aatgagttcttaaccgacaaacctacatttagagatgtggccgaagactttgtgaatttt
attcgcggcgctcagcttgttatccacaatgcgcccttcgatgtgggctttatggatcat
gagttcggaatggaaccgaaaacccgtggcgttatcaccaaagatatttgtagtgttctt
gataccttggcggtcgcacgaaaaatgcacccagggcaaaagaacaacctagatgcgttg
tgtaagcgttacggcatagacaacagccaccgtgagcttcacggcgcactgctggatgct
gaaattttagctgatgtttacctgctaatgacaggtgggcaaactaaacttaatttggcc
tcgaaaggcagcggcgaaacccaatcagatgcacttcgtcgtttgaaccgaaatggaaat
aaattaaaggttatcaaggctaacgccgatgaattagcacagcatgaatctcgtttagat
atcgtagaaaaagcggggggtaaatgtttgtggcgcccagagcaagagcaaaccgatgca
taa
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