Alteromonas stellipolaris LMG 21856: AOR13_2303
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Entry
AOR13_2303 CDS
T04153
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
asp
Alteromonas stellipolaris LMG 21856
Pathway
asp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AOR13_2303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asp03400
]
AOR13_2303
DNA repair and recombination proteins [BR:
asp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOR13_2303
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AOR13_2303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
Kinesin
AAA_30
UvrD-helicase
CENP-O
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
ALM91315
LinkDB
All DBs
Position
complement(2649217..2651232)
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AA seq
671 aa
AA seq
DB search
MSKGFELHSSYKPAGDQPAAIETLVDGLESGLAAQTLLGVTGSGKTFTMANVISEVQRPT
LIMAHNKTLAAQLYGEMKDFFPNNAVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDHIE
QMRLSATKALMERRDVVIVASVSAIYGLGDPESYMKMLLHLRQGDTMDQRDILRRLAELQ
YKRNDLAFERGTFRVRGDVIDIFPADSEKQAVRVELFDDEIDKISLFDPLTGAVDKTVVR
ATVFPKTHYVTPREKILDAIEHIKGELKSRKAQLLEINKLIEEQRISQRTQFDIEMMMEL
GYCSGIENYSRYLSGRAPGEPPPTLLDYFPADGLMFIDESHVTVSQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPLKFEEFEQICPQTVYVSATPGEYELKKTHGDIVEQVVRPTGLLD
PIIEVRPVATQVDDVLSEIHKRVALDERVLITTLTKRMAEDLSEYLNEHGVKVRYLHSDI
DTVERIEIIRDLRIGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRAERSLIQTIG
RAARHINGRAILYGDKITKSMKKAMDETERRREKQVEYNKANNITPMRLNKPITDIMDLG
EGAHPASGKVRLRKVEEKKKQKKAASATELMEQISELEKQMFEYARELEFEKAASLRDDV
EALRKQVVALS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaggttttgaacttcattcaagctacaagccagccggcgatcaacctgctgcc
atagaaaccctggttgatgggttagaaagtggcctagcagcgcaaaccctgttaggggtt
accggttcgggtaaaacttttaccatggcgaatgttattagtgaagttcaaaggccaacg
ctgattatggcgcataacaaaaccttggcggcacagttatacggggaaatgaaagatttt
ttccctaacaatgccgttgagtactttgtttcttattacgactactatcagcctgaagca
tacgtacctagtactgatacttttatagagaaagatgcttcgataaacgatcacatcgag
caaatgcgtttgtctgccacaaaagcattgatggagcgccgagatgttgtgattgtcgcc
agtgtgtctgctatttatggtttgggtgatcccgagtcgtatatgaaaatgcttttgcat
ttgcgacagggcgataccatggatcagcgcgatattttgcgcagacttgccgagcttcaa
tacaaacgcaacgatttagccttcgaacggggtacatttcgcgtacgtggtgacgtgatt
gatatcttccctgcagactcagaaaagcaagcagtgcgtgttgagctatttgacgatgag
atagataaaattagtttgttcgatccgctaacaggcgcagtcgacaaaacagttgtgcgt
gcaacggtttttccgaaaactcactatgttaccccaagagaaaaaatccttgatgccatt
gagcatataaaaggagaattgaagtctcgaaaggcgcagctgctagaaattaataagtta
atcgaagagcagcgaatttctcagcgtactcaatttgatattgagatgatgatggagctt
ggttattgctcgggcatagaaaactactcacgttatctatcgggtcgcgcacctggtgag
ccgcccccaaccttattagattactttcctgctgatggccttatgttcattgatgaatcc
cacgtaacggtttctcaaattggtgccatgtataaaggggatcgctctagaaaggaaacc
ttggtggaatatgggttccgtttaccatcagcactagataaccgtccacttaaattcgaa
gaatttgagcaaatttgcccacaaacggtatacgtatcggccactcccggtgagtacgaa
cttaaaaagacccatggtgatattgtagagcaagtggtgcgcccaacagggttattagat
cccatcattgaagtgcgccccgtcgctacccaagtggatgacgtattatcggaaattcac
aagcgagtagcgcttgatgaaagggtacttattactacactcactaagcgtatggccgaa
gatttaagtgaatacttaaatgagcatggcgttaaagtacggtatttgcattctgatatc
gacacggtagaacgcattgagattattcgcgacttgcgtattggtaagttcgatgtgctg
gtgggcattaacctacttcgtgaaggcctcgatatgcctgaagtttctctggtggcgatt
ttagatgccgataaagaaggctttttacgagccgaacgctcacttattcaaaccataggt
cgagccgcacgtcatattaacgggcgcgccattttatatggcgataaaatcacaaagtct
atgaaaaaagccatggatgaaactgaacgccgccgtgaaaaacaggttgagtacaacaaa
gccaataatataacgccgatgcgtttgaataagccgattaccgatattatggatttgggc
gaaggtgctcatcctgcctccggcaaagtaaggcttcgcaaagtagaagagaagaagaaa
cagaagaaagcagcaagtgcgacagagttaatggagcaaatttccgagcttgaaaagcag
atgtttgaatatgccagagagcttgaattcgagaaggcggcctcgttaagagatgatgtg
gaagcactccgaaaacaggttgttgcactgtcttaa
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