Alteromonas stellipolaris LMG 21856: AOR13_2533
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Entry
AOR13_2533 CDS
T04153
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
asp
Alteromonas stellipolaris LMG 21856
Pathway
asp03030
DNA replication
asp03430
Mismatch repair
asp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOR13_2533
03430 Mismatch repair
AOR13_2533
03440 Homologous recombination
AOR13_2533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asp03032
]
AOR13_2533
03400 DNA repair and recombination proteins [BR:
asp03400
]
AOR13_2533
Enzymes [BR:
asp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOR13_2533
DNA replication proteins [BR:
asp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AOR13_2533
DNA repair and recombination proteins [BR:
asp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AOR13_2533
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ALM91538
LinkDB
All DBs
Position
complement(2925002..2928466)
Genome browser
AA seq
1154 aa
AA seq
DB search
MSSPFIHLRVHSDYSMMDGLNKVKPILGKVSEYNMPAVAITDQMNMCGLVKFYSGAHGLG
IKPIIGTDFWVTNEAFGDEPFRLTLLAMNNEGYKNITVLISKAYLRGHVAHRAVIDQDWL
IEHAEGVIILSGAQLGDVGVALTKNNTSLLAESLAFYKTHFPDRFYLELIRTGRPGEEDY
LHRAVECAEREGLPVVATNEVCFINKEGFDAHEIRVCIHDGYTLDDTRRPKRYSDQQYLR
TSEEMVELFSDIPEAIENTVEIAKRCNVTVRLDEYFLPQFPTGGMTTEDFLVKVSEEGLE
RRLAFLFPDEQVRAEKRPEYDDRLRIELEVINQMGFPGYFLIVMEFIQWSKDNNIPVGPG
RGSGAGSLVAYALDITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRQAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFAAEPRL
PEVYDQDEEVKDLIDMARILEGVTRNAGKHAGGVVIAPTTITDFAPLYCDDEGNNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWAIDMVKEGKGIDIDITSIPLADAKSFRTLLNAET
TAVFQLESRGMKELIKRLKPDSFEDIIALVALFRPGPLQSGMVDNFIDRKHGREAISYPD
AEYQHECLQEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMAKQRG
AFAEGSKNNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAA
VMSADMDNTDKIVTLVDECSRMGLELLPPDLNAGKHKFTVDEKGRIVYGIGAIKGVGEGP
IEAIIEARENQGAFKDLFDFCAKIDIKRVNKRVLEKLVLAGALDNLGPHRAALMASLPDA
IAAAGQHAKAESFGQSDMFGLLTTEPDEVEQAFADVPLWPEKVWLEGEKDTLGLYLTGHP
INQYVEEIRHYTDGRLVDLKPTGKEQMANAVGLVLGVRVMTNKRGRRWAIVTLDDKSARI
DARFFPDTFEQYESMLETDRILLIKGQVSFDDFSGGNTITARDVMDIVQAREKNARALAL
NVETQLLEPKKINQMQSILQAFKGGSCPVHLLVTHPDAEALITCGARWFVTPEDQLLHDL
KQCLGEKAVSILYH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgccttttattcatttacgcgtacacagcgattattccatgatggatgggctt
aataaggttaagcccatacttggcaaagtatccgagtacaacatgcctgctgtggcgatt
accgaccaaatgaatatgtgtggtttggtaaagttttattctggcgcacatgggcttggc
attaaacctattattggtaccgatttctgggtgaccaatgaagccttcggcgatgagccg
ttccgtcttaccttgcttgcgatgaataacgagggctataagaacattacggttcttatt
tctaaggcctacttgcgaggtcacgttgcgcatagagcggttatcgatcaagactggctt
attgaacatgcagaaggcgtaatcatactctctggtgctcaacttggggatgttggtgtt
gcacttactaaaaataacaccagcttgttggcagaatcattggccttctataaaacccat
ttcccagaccgtttttatcttgagcttattcgtactggtcgccctggtgaagaagattac
ttacatcgcgcggtagaatgtgccgagcgagaaggcttgcctgtagtggcaaccaatgaa
gtgtgcttcattaataaagaaggttttgacgcgcatgaaatacgagtatgtattcatgat
ggctacacactagatgatactcgtcgacctaagcgttacagcgaccagcaatatcttcgt
accagcgaagaaatggtggagctgttcagtgatattcctgaggccatagaaaacacggtt
gaaatcgctaagcgatgcaacgttacagtacgattagatgaatactttttgccccagttt
cctactggcggcatgaccactgaagattttttagtaaaagtgtcggaagaagggcttgag
cgccgtttagcgttcctgtttcctgatgaacaagtacgggcagaaaaacgccccgagtac
gacgacaggctccgtatcgagttagaagtaatcaaccaaatgggtttccctggttacttc
cttatcgtaatggagttcattcagtggagtaaggacaacaatattccagtaggcccaggt
cgtggttctggtgcgggctctctagtggcttacgcattagatattaccgaccttgatccc
cttgaattcgacttactattcgaacgattccttaacccagaacgggtatcaatgccggat
ttcgatgttgatttctgtatggatagacgtgatgaggttatcgaccacgttgccgagctg
tatggtcgtcaggcggtatcgcagattattacctttggtaccatggcggcaaaagccgtg
gtgcgcgatgtgggccgagtactaggtcacccttacggttttgtcgatcgtatttcaaag
cttatcccaccagaccctggtatgacgcttgaaaaggcgtttgctgccgagcctcgtttg
cccgaagtgtacgaccaagacgaggaggttaaagatctcatcgatatggcgcgcatttta
gaaggcgtaacgcgaaatgcaggtaaacacgctggtggtgtagttattgcgccaaccact
attaccgattttgcgccgctatactgcgacgatgaaggtaataaccctgttactcagttc
gataaaaacgatgttgaaaccgcagggctagttaagttcgacttccttggattacgtacg
ctaaccattatccagtgggccattgatatggtgaaggaagggaagggtatcgacattgat
attacctctattcctttggcggatgcaaaaagctttcgtaccctgctaaatgcggaaact
accgcggtgttccagttggaatcccgaggtatgaaagagctaataaaacgtcttaagcca
gatagttttgaagatattatcgcattggtagccctatttagaccgggtcctttgcagtcg
ggcatggtagataactttatcgaccgtaagcatggccgtgaagctatttcttatcccgat
gctgaataccaacacgaatgtttgcaagaaattttggagcctacctacggcattatcttg
tatcaagaacaggtaatgcagattgcgcaggaaatggcgggctattccctaggtggcgcc
gatttgttacgtcgtgctatgggtaagaaaaagccagaagaaatggctaagcaacgtggc
gcgttcgctgaaggctcgaagaacaataacatcgatccagatttggcgatgaaaattttc
gacttggtagaaaaattcgccggctacggatttaacaaatctcactctgctgcttacgcc
ttggtgtcttatcaaactttatggttgaaagcccattatcctgctgaattcatggccgca
gtaatgtcggccgatatggataataccgataaaattgttaccttggttgatgaatgcagt
cgaatgggtcttgagttattgcccccagacttaaacgcaggtaagcataagttcaccgtc
gatgaaaaaggcagaattgtttacggcattggcgccattaaaggggtaggtgaaggcccc
atagaagccattatcgaagccagagaaaaccaaggtgcgtttaaagatttattcgatttt
tgtgcaaaaattgatattaagcgcgttaataaacgtgtactggaaaaactagtacttgcc
ggcgcgttagacaatttagggcctcacagggctgcactcatggcatctttacctgatgct
atcgcagccgcagggcagcatgccaaagcggaatcctttgggcagtcagacatgttcgga
ttgctaacgactgagcctgatgaagtagagcaagcttttgccgatgtgccactatggcca
gaaaaagtatggttagaaggtgaaaaagataccttaggtttatacctaacagggcaccct
attaaccagtacgtcgaagaaattaggcattacactgatggaaggctggttgacttaaaa
cccacaggcaaagaacaaatggccaatgctgttggcttagtgcttggggttagggtaatg
accaataagcgaggaagacgttgggctattgtcacattggatgataaaagtgcgcgaata
gacgctcgttttttcccagataccttcgaacagtatgaatctatgctagaaactgacaga
atattgctcataaagggacaggtcagctttgatgatttctctgggggcaatacaatcacc
gcccgtgatgtaatggacattgttcaggcacgggagaaaaacgcgagagcattggcgtta
aatgttgaaacccagttgcttgaaccgaaaaagattaatcaaatgcaatctatcttgcag
gcctttaaaggcggaagttgcccggtgcatttattagtaacccatcccgatgcagaagca
ctgattacgtgtggtgcacggtggtttgttacaccagaagatcaacttttgcacgatctc
aaacaatgtttgggagaaaaagccgtttcaatcctctaccattaa
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integrated database retrieval system
