Alteromonas stellipolaris LMG 21856: AOR13_2764
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Entry
AOR13_2764 CDS
T04153
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asp
Alteromonas stellipolaris LMG 21856
Pathway
asp03410
Base excision repair
asp03430
Mismatch repair
asp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOR13_2764
03430 Mismatch repair
AOR13_2764
03440 Homologous recombination
AOR13_2764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asp03400
]
AOR13_2764
DNA repair and recombination proteins [BR:
asp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AOR13_2764
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AOR13_2764
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AOR13_2764
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
BMFP
PIGA
Motif
Other DBs
NCBI-ProteinID:
ALM91768
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Position
complement(3187068..3188789)
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AA seq
573 aa
AA seq
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MILPVVRRETGDAPLASALHPVIDRIYRGRNVQDVSELENGLKGLTHFNELKGMAAAASI
LADTIEQDKTLIIVGDFDADGATSIAVCIHSLHMMGFNNVDYLVPNRFDFGYGLSVPIVD
IAKQQGADVIITVDNGIACIEGVTHAKALGIEVIVTDHHLPGDTLPPADAIVNPNQPGCT
FPSKNLAGVGVAFYIMLALKTELQQRNWFTEKHIPAPNLASLLDIVAVGTVADVVVLDKN
NRILVHQGLQRIRAGKCRPGIKALVEVANRDCTHLTSTDLGFVIGPRLNAAGRLDDMSQG
IACLLEDDTMQARMIASELDALNRERREIETGMKAQAEQVLEKMSLTEGDIPAALVVYQA
DFHQGVIGIVAGRLKEKYLKPVIAFAHQDDTTIKGSARSIPGVHIRDVLDEVNTRFPGVI
DKFGGHAMAAGLSLPVANLAAFEKAFINIAKQHVDKLDGNQVLLSDGSLTGQELSLSFAH
LLRQAGPFGQGFESPLFDGEFQVVQQRLVGEKHLKLVLREPSVGEVDAIAFNIDIKAWPN
AMVKQVRIAYRLDVNVFRGQESVQLIIEQLESA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgatattgcctgtagtgcgccgtgaaactggtgacgcccctcttgcttctgctttgcac
cctgttatagaccggatttatcgcggcagaaacgtacaagatgttagcgaattagaaaat
ggccttaagggccttacccactttaatgagctaaagggtatggctgctgcggcgagcatt
ctggctgacaccattgagcaggataagacccttattattgtaggtgacttcgatgccgac
ggcgcgactagtattgcggtgtgtatccactcactgcacatgatgggcttcaacaatgtg
gactatcttgtgccgaatagattcgacttcggctatggtctaagcgtgcctattgtggat
atcgctaagcagcaaggcgccgatgttatcattacggtagataatggcattgcatgtatt
gaaggggtgacgcatgcaaaagcattgggcatagaggttattgttactgatcaccactta
cccggtgatacgcttcctcccgccgatgcgattgtaaatcccaatcaaccaggttgtacc
ttcccctctaaaaacttagctggggtaggtgtggcgttttacattatgttagcgcttaaa
accgaactacagcaacgaaactggtttactgaaaagcatattccagcgcctaatttggca
tcgttactagacattgtggctgtaggcaccgtggccgatgtggtggtattagataaaaac
aaccgaattttggtacaccaaggcttacagcgaattcgagcaggtaaatgcagaccgggt
attaaagccttagttgaagtggctaatcgagactgcactcaccttacctctaccgattta
ggttttgttattggccctcgcttaaatgcagccggcagattagacgatatgtctcaaggc
atagcttgcctgttagaagacgatactatgcaagctcgcatgatagcctcggagctagat
gcactaaaccgcgaacgtcgagaaatagaaactggaatgaaggcgcaagccgaacaagtg
ctagaaaaaatgtccctcactgaaggcgatattcctgccgcattggtagtatatcaagcg
gattttcaccaaggtgtaattggtatcgtggcggggcgcttaaaagaaaagtatttgaaa
ccggttatcgcttttgctcatcaagacgatacgactataaaaggttcggctcgctctatc
ccaggagtgcatattcgtgatgtactcgatgaagtgaatacccgctttccgggcgttatt
gataaatttggtggacatgcgatggcagccgggttgagtttaccggttgctaacttagcc
gcattcgagaaggccttcatcaacattgctaagcagcatgtggataaactagacggcaac
caagtactactgtctgacggcagcttaacgggacaagagttgtctttgtcttttgcccat
ttgctcaggcaagcaggtccctttggtcagggctttgaatcgccactctttgatggtgag
tttcaagtggtgcaacaacgtctggtgggtgaaaaacacttaaagctggtattgcgagaa
ccttcagtgggcgaagtagatgccattgcctttaacattgatattaaagcttggccgaat
gccatggtaaaacaagtgcgtattgcctaccgattagatgtaaatgtatttcgcggccaa
gagtctgtacagcttattatcgaacagctagaaagcgcataa
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