Alteromonas stellipolaris LMG 21856: AOR13_312
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Entry
AOR13_312 CDS
T04153
Name
(GenBank) Pectate lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
asp
Alteromonas stellipolaris LMG 21856
Pathway
asp00040
Pentose and glucuronate interconversions
asp01100
Metabolic pathways
asp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
asp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AOR13_312
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AOR13_312
Enzymes [BR:
asp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AOR13_312
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Motif
Pfam:
Pectate_lyase_4
RicinB_lectin_2
Ricin_B_lectin
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
ALM89366
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Position
394597..396633
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AA seq
678 aa
AA seq
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MNVITNLKKGRASIAVLLVCSMSGAYGSGFHTQNGGATGGAGGDVVRVTTGKQIHEALCN
RNTSETPIIIEVEGTINHGNTEKVSGSSCNTAEDKIELKDISNVTLIGVGQGALFDELGI
HIRNSTNIIIRNVHVRNVKKSGSPTSNGGDAIGIETDVRNVWVDHVTLEASGGESEGYDG
LFDVKDNSKYITLSYSHLLNSGRGGLVGSSESQVNNGPLTYHHNIFENLNSRVPLVRGAT
AHIYNNHYDGIESSGINSRAGAEVKVENNYFEDAKDVLGTFYTTTDGDWQVAGNIFGSGV
TWSSSDDDYQPAGPNVVSTTSVGIPYSYTLDNASCVRNILQQTAGANKNLQVSDGSCGTT
GGGDNGGGDNGGGDNGGGDNGGGDNGGGDNGDTPSGVNLSLSADADGSSKASGTSYGNVK
DGDTSTYWSPNGSTGRVSIKGLDTTINAVRIVERSGAEGRVTSWRLVNNDTGSIITSGNT
IPDPITFSDVSLGKLNFVIDSSSSTPQIAEFEIYFGLDSNGGGSSDGGSNVVNGTVNGIY
RITPVHSGRSFDVANCGTTNGSNIRQWEWLDNDCQKFTISQVDGIWHRISPLNALQQSLE
ISNNSTSAGENVQLWQYSGGNNQLFRFQSAGSGKWRIVARNSELCLDIAGQGGGNGANII
QWTCIAQADNQMFELTRQ
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttataactaatttgaagaaaggtagagcctcgattgctgtattgcttgtgtgc
tcaatgtcaggtgcttatggctcgggctttcatacccaaaacgggggtgcgaccggtggc
gcaggaggtgatgtggtacgcgtaacaacgggcaaacagatacatgaggcactctgtaat
cggaacaccagtgaaacaccgattatcatcgaagtagaaggcactataaatcacggtaat
actgaaaaagtgtcgggaagtagttgcaataccgcagaggataaaattgaattaaaagac
attagtaacgtaacccttataggggtaggtcaaggtgccttgtttgatgaacttggaata
cacatacggaattctaccaacattattatacgaaatgttcacgttcgaaatgtgaaaaaa
tcgggttcaccaacatctaacggtggcgatgccatcggtattgaaaccgatgtgcgaaac
gtgtgggtagatcacgtaacattagaagcaagtggcggcgaaagcgagggttacgacggg
ttatttgatgtaaaggacaattcaaaatatatcacgctttcgtacagtcatttgctcaac
tctggtcgtgggggattagtaggttcaagcgaatcccaagtcaataatgggccattaacc
tatcaccataatatttttgagaatttaaactcgcgagtacctctagtgcgaggggccact
gcgcatatttacaacaatcattacgacggtattgaatcgtcgggtatcaattcaagagca
ggggctgaggttaaagttgagaataactattttgaagatgctaaagatgtgttgggaacg
ttttataccacgactgatggcgattggcaggtagccgggaacatttttggaagcggcgta
acatggagttcatctgacgatgactatcagccagccggtccgaacgtggtttctaccact
agtgttggcatcccgtattcttatactctcgataatgcctcatgcgtccgcaacatcttg
caacaaacagctggcgcgaataaaaatttgcaagtatctgacggtagttgtggaactact
ggcggtggtgacaacggcggtggtgacaacggcggtggtgacaacggcggcggtgataac
ggcggcggtgataacggcggcggtgataacggcgatacgccttccggcgttaacctctct
ctctcggccgatgctgatggtagttcaaaagcaagtggtaccagttatggcaacgttaaa
gatggggataccagcacctattggtcacctaacggttcaaccggtcgcgttagtatcaaa
gggttggacacaaccattaacgcagttcgaattgtagaaagaagtggtgctgaagggcgc
gttacgtcttggagattggttaataacgacactggttcaatcattacatcaggtaacact
attcctgatcccataacgttttcagatgtaagcttaggcaaacttaactttgtcattgat
tcatcatcatcgacgcctcaaatagctgaattcgaaatttattttgggctagatagtaat
ggagggggcagtagtgatggaggttcaaatgttgtcaatggcacggtgaacggaatctat
agaattacccctgtacatagcggacgaagttttgatgtagccaactgcggaactacaaat
ggttcaaatattcgccaatgggaatggttagacaatgattgtcaaaaatttaccatttcg
caagtggatggaatttggcaccgtatctcaccattaaacgcattgcagcagagtttagag
atatcaaataactcgacatctgcaggggagaacgttcaattgtggcaatatagtggaggc
aataatcaactgttccgctttcaatctgccggttcgggtaagtggcgaattgtagcaaga
aacagcgagctatgccttgatatagctgggcagggcgggggtaatggtgccaatataatt
cagtggacttgtattgctcaagcagacaatcaaatgtttgaattgactagacagtaa
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