Alteromonas stellipolaris LMG 21856: AOR13_3509
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Entry
AOR13_3509 CDS
T04153
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
asp
Alteromonas stellipolaris LMG 21856
Pathway
asp03030
DNA replication
asp03410
Base excision repair
asp03420
Nucleotide excision repair
asp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AOR13_3509
03410 Base excision repair
AOR13_3509
03420 Nucleotide excision repair
AOR13_3509
03440 Homologous recombination
AOR13_3509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asp03032
]
AOR13_3509
03400 DNA repair and recombination proteins [BR:
asp03400
]
AOR13_3509
Enzymes [BR:
asp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AOR13_3509
DNA replication proteins [BR:
asp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AOR13_3509
DNA repair and recombination proteins [BR:
asp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AOR13_3509
NER (nucleotide excision repair)
GGR (global genome repair) factors
AOR13_3509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WH_GTF3C1_N
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
ALM92502
LinkDB
All DBs
Position
4082984..4085644
Genome browser
AA seq
886 aa
AA seq
DB search
MLKSLIRQYNPTHMAVIFDAKGKTFRDDIYEEYKANRPPMPEELRSQIEPLHTIIKAMGL
PVIVESGVEADDVIGTLACRATEHGIDTLISTGDKDMAQLVNDNVTLINTMTNQIMDIEG
VNMKFGIPPELVIDFLALKGDKVDNIPGVPGVGDKSAQALLNGIGGISAIYDNLDKIADL
SFRGSKTMATKMQEYEEQARLSYTLATIAIDLDLEYKIDELRPTAPDNQTLQSMFAEYEF
KRWHTEISALIAGDGSESSKPTSVESGSDSSDTDEVLPESNIDKSGYEVVLDEATFEAWI
EKLKAAPLIAVDTETTSVNYMEAELVGVSFCIEPGAAAYVPVAHDYPDAPTQLSREYVLA
ALKPILESETIIKVGQHIKYDKNVLAHYDIILNGIGFDTMLESYVLNSTAQRHDMDSLAL
AYLGHKTIHFEEIAGKGAKQLTFNQIGLEEAGPYAAEDADITMRLHQAIWAKLENEPKLK
TLLVDVEVPVACVLSRMEQQGVLIESQRLRQQSQDLATRIAELEKEVHEEAGEVFNLGSP
KQLQHILFEKMSLPVIKKTPKGAPSTSEEVLQELALEFPLPKKLMEYRGLTKLKNTYTDK
LPKMINHRTGRVHTSYHQAITATGRLSSTDPNLQNIPIRNEEGRKVRQAFVPREGYKIVA
ADYSQIELRIMAHLSGDEGLLDAFAHGRDIHKATAAEVFGVTLDEVTTEQRRSAKAINFG
LIYGMSAFGLAKQLNIPRHEAQKYMDLYFERYPGVLEYMDSTREGAKEKGYVETVFGRRL
YLPDIKASNGARRKGAERAAINAPMQGTAADIIKMAMIKVDDWITSLESDNIIMMMQVHD
ELVFEIKEEHLEEQVKNIVSLMEQAAVLNVPLVVEAGVGDNWDEAH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaagcttgattagacagtacaaccctactcacatggcagtcatctttgatgcc
aaaggtaaaacgtttcgcgacgatatttatgaagaatataaagcgaatcgcccacctatg
ccggaagagttacgtagtcaaatagaaccattacataccatcatcaaagccatggggtta
cctgtaatcgttgagtctggcgttgaagccgatgatgttataggtaccctagcctgtcgt
gccacagagcacggtatcgatacgttgatcagtactggcgataaagacatggcgcaactc
gtcaacgacaatgtcaccttgatcaataccatgacgaatcagattatggatattgaaggg
gtaaacatgaaattcggtattccaccggaactggtaatcgacttcttagcccttaagggt
gacaaggtagataatattcctggcgtacccggtgtgggtgataaaagtgcccaagcgcta
ttaaacggtattggtggcatcagtgctatctatgacaatcttgataaaattgccgatctc
tcatttagagggagcaagacgatggcaactaaaatgcaagagtatgaagaacaagctcgc
ttgtcatacacccttgccacgattgccattgatttagatctagaatacaaaatagatgag
cttcgccctactgctccggataaccaaaccttacagtcgatgtttgcagagtatgaattc
aagcgctggcataccgaaattagcgcattgatcgcaggtgatggtagtgagtcctcaaag
ccaacaagtgttgagagcggatcagattcaagcgatacagatgaagtattaccagaaagt
aatatcgataaatctggttatgaggtggtgttagatgaagctacgtttgaggcttggatt
gaaaaactaaaagcagcaccgcttattgctgttgatactgaaacgaccagtgttaactac
atggaagctgaacttgttggtgtttctttttgtattgaacctggtgctgcggcttacgtg
ccagttgctcatgattaccctgatgcacccacgcagttatcaagagagtacgtgctagca
gcattgaagcctattttagagtctgaaaccatcatcaaagtgggtcagcacattaaatat
gacaagaatgtactcgcgcattacgacatcatcctaaatggtatcggctttgacactatg
ctggaaagctatgtgttaaacagcaccgcgcagcgacatgacatggattcgctagccctt
gcctatttaggtcataaaacgattcactttgaagaaattgccggcaaaggcgctaaacag
cttacttttaaccaaattgggttagaagaagctggcccttatgctgccgaagatgctgat
attactatgcgccttcatcaagcaatatgggcaaagctagagaacgaacccaaacttaaa
acgttgttggttgatgttgaagtgccggttgcttgtgttttatctcgtatggaacagcaa
ggtgtattaattgaaagccaacggttgcgccagcagagccaagacttagctacgcgtatt
gctgagctagaaaaagaagtgcatgaagaagcaggcgaagtatttaatttaggttcacca
aaacagcttcaacacattttgtttgagaagatgtcgttaccggttatcaagaaaaccccc
aagggtgccccttctacttctgaagaagtattacaagaacttgcccttgaattcccgtta
cctaaaaagttaatggagtatagagggttaaccaagcttaagaatacgtataccgacaaa
ctccctaaaatgattaatcatcgcacgggtcgtgttcatacttcctaccatcaagctatt
acggcaacgggccggttgtcgtcaacggatcctaaccttcaaaacattcctattcgaaat
gaagaaggccgtaaggtaagacaagcatttgttccacgtgaaggctataagattgtagct
gccgattattctcaaattgaacttagaataatggcccatttgtcgggcgatgaaggtctt
cttgatgcatttgctcacggcagagacattcacaaagctaccgctgcagaagtatttggg
gttacgcttgatgaagtgacaacggagcaacgtcgtagtgctaaggccataaactttggt
ttgatctatggaatgagcgcctttggccttgccaaacaacttaatattccacgtcacgaa
gcacaaaaatacatggacttatattttgagcgctaccctggcgtgcttgagtacatggac
agcactagagaaggcgctaaagaaaaaggttacgtggaaacagtgtttggtcgacgcttg
tacctacccgacattaaagccagtaatggggcgcgccgtaaaggcgcagaacgggcagca
attaatgcgccgatgcaaggcacagctgccgacatcattaaaatggccatgataaaggtt
gatgactggatcacctcacttgaaagcgacaatataatcatgatgatgcaggtacacgat
gaattggtgtttgagattaaagaagaacatctagaggaacaggttaaaaatatcgtcagc
ttgatggaacaagccgctgtattaaatgtgccgctggtggttgaagcgggcgtgggcgat
aactgggatgaagctcactaa
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