Alteromonas stellipolaris LMG 21861: AVL57_02270
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Entry
AVL57_02270 CDS
T04545
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq00300
Lysine biosynthesis
asq00470
D-Amino acid metabolism
asq01100
Metabolic pathways
asq01110
Biosynthesis of secondary metabolites
asq01120
Microbial metabolism in diverse environments
asq01230
Biosynthesis of amino acids
Module
asq_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AVL57_02270
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AVL57_02270
Enzymes [BR:
asq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AVL57_02270
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AMJ72902
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Position
complement(254660..255910)
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AA seq
416 aa
AA seq
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MDFFAYKNGQLFAEDVAVADIAAQYQTPVYVYSRATLERHWHAFNDAIGEHPHLICYAVK
ANSNLGVLSTLAKIGSGFDIVSGGELARVIEAGGDASKVVFSGVGKKADEIRYALEQGIM
CFNVESEPELHRINAVAESLGKKAPISLRINPDVDAKTHPYISTGLKANKFGIARERALQ
TYELAASLPYLNVVGMDCHIGSQLTEIGPFVDALERLLLLIDELAERGITIDHLDVGGGL
GVTYNDEEPPHPKAYAAAMAEKMVGRENLKLILEPGRAIAANAGILVTEVEFIKEGEEKS
FAIVDAAMNDLLRPALYSAWQNIIPVKQESTATARNYDVVGPVCETGDFIGKDRELAIEP
TDLLAVRSAGAYGFAMASNYNSRCRPAEIMVDGDATIVVREREILKDLWKGEHKLT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtggattttttcgcttataaaaacggccagcttttcgctgaagatgttgccgttgcagat
attgctgcacagtaccaaacccctgtttatgtctactcacgggcaacgttagaacgtcat
tggcatgcctttaatgatgcaattggtgagcaccctcaccttatttgttatgcagtaaaa
gccaattcaaacctaggtgtactcagtacattagccaaaattggctctggttttgacatt
gtttctggtggtgaacttgcccgagttattgaagccggtggtgatgccagcaaagtggtc
ttttcgggtgtaggtaaaaaagcagacgaaattcgttacgcgttagaacaaggcattatg
tgctttaacgtagaatctgagcctgaattgcatcgtattaacgcggtagccgaatcgctc
ggcaaaaaagcgcccatttcacttcgcataaacccagatgtagatgcaaaaacgcatccc
tacatttcaacaggattgaaagcaaataagtttggtattgcccgtgaacgtgcactgcaa
acctatgaacttgccgcatcacttccttacttgaacgtagtgggtatggactgccacatt
ggttcgcaattgactgaaattgggccttttgttgatgcactagagcgtctattgctgctt
attgatgaattagcagagcgcggtattaccattgatcatttagatgttggtggtggttta
ggcgtgacttataacgatgaagaaccaccgcatccgaaagcttacgctgcggccatggca
gaaaaaatggtgggtcgtgagaaccttaagctcattttagagcccggtcgagccattgcc
gcaaacgcaggtattttggttactgaggttgagtttattaaagaaggtgaagagaaaagc
ttcgctattgttgatgccgctatgaatgacctgcttcgacctgcactttactctgcatgg
caaaatatcattccagtaaaacaagaaagtactgccacagcacgcaattatgatgttgta
ggcccggtatgtgaaaccggtgatttcatcggtaaagaccgtgaacttgctattgaacca
accgacctgttggcagtgcgaagtgccggtgcgtatggctttgccatggcatcgaactac
aatagccgctgccgtccagcagagattatggtagatggtgatgccacaattgtggtgcgt
gaaagagaaattctaaaagatctctggaaaggtgagcacaaacttacgtaa
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