Alteromonas stellipolaris LMG 21861: AVL57_03995
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Entry
AVL57_03995 CDS
T04545
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
asq
Alteromonas stellipolaris LMG 21861
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asq03021
]
AVL57_03995
Transcription machinery [BR:
asq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AVL57_03995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AMJ76271
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All DBs
Position
complement(652277..653209)
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AA seq
310 aa
AA seq
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MPADLKTDKTISDDTDTDSEELVLSQDDQPKNLDATQLYLGEIGFSPLLSAEEEVFFARK
ALRGCEASRKRMIVSNLRLVVKIARRYNNRGLALLDLIEEGNLGLIRAVEKFDPERGFRF
STYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELSQKLDHEPTAEEIALAL
DKPVEDVTKMLRLNERITSVDTPIGGENDKALLDILADEKEFGPEENLQDSDIKSNIVGW
LEELNPKQREVLARRFGLMGYEPSTLEDVGAEIGLTRERVRQIQVEALRRLRDILGHQGL
SLENLFNQMN
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgatctgaaaacagataaaacaatatctgatgacactgacaccgattcagaa
gaattagtgttaagccaagacgaccaaccgaaaaatctagatgccacacagttatatcta
ggtgaaatcggtttctcgcctctgcttagtgcagaagaagaagtgtttttcgccagaaag
gctctacgtggatgtgaagcctcacgcaaacgcatgattgttagtaacttacgcctagtt
gttaaaatagcgcgtcgatacaacaaccgcggtcttgccctgttagacctaatcgaagaa
gggaatctaggacttatacgtgctgttgaaaagttcgatcccgaacgtggttttcgattt
tcaacgtacgcaacgtggtggataagacaaaccattgaacgcgcaattatgaaccaaacg
cgcactattcgcttgccaatccacgtcgttaaagaacttaatgtatatttacgcgcagct
cgtgagttatctcagaaacttgaccacgaacctactgccgaagaaatcgcccttgcctta
gacaaacctgtcgaagacgttaccaagatgctgcgacttaatgaacgtattacgtcggta
gataccccgattggtggcgaaaacgataaagctttgttagatattctagccgatgaaaaa
gaattcggccctgaagagaacttgcaagactcagacatcaaatcaaatattgttggctgg
ttggaagaactcaatcctaaacaacgtgaagtattggcaagacgctttggattaatgggt
tatgagccctcaacacttgaagacgtgggtgctgaaattggtcttactcgtgaacgagtt
cgtcaaattcaagtagaagcactacgtcgattgcgagacattctaggccaccaaggccta
tcactagagaatttatttaatcaaatgaattaa
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