Alteromonas stellipolaris LMG 21861: AVL57_05445
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Entry
AVL57_05445 CDS
T04545
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
asq
Alteromonas stellipolaris LMG 21861
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_05445
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVL57_05445
Archaeal homologous recombinant proteins
AVL57_05445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AMJ73466
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All DBs
Position
1027904..1029193
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AA seq
429 aa
AA seq
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MKVLHTSDWHLGQSFFTKSRKNEHEQFFKWLLGVVEQENIDAVVVAGDIFDTGTPPSYAR
ELYHQLVGDFQGVGCTLVVLGGNHDSVSVLNESRELLSYLNCHVIASTYGNTEAQVLPLR
TRGGEIGAILCAVPFIRARDVLKSEAGESAIEKRQALGEAIKQHYANLYQIALDKRSVLN
VDVPIIATGHLTALGVSQSESVRDIYIGTLEGFSAEGFPPADYIALGHIHRPQKVAGCDH
IRYSGSPIPLSFDELKSQKQVLIATFDNKTLVEVESKPIPRFQAMAVLRGNLEDIELALQ
QNEAVKSASAEHPAWLCIEVETQDYLTDLQQRIQALIDDKPAEILQLKRMRKQRASAISA
EENVNLSELSVREVFDARLSLEAFESDEDKQRKQRIQTLFEQVVDDVQLSHEGSEDAVDA
NAQANEGNL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctccacacctcagattggcatttaggtcaaagtttcttcaccaaaagccgt
aaaaatgaacacgagcaattttttaaatggctacttggggtggttgagcaagaaaacata
gatgccgttgttgtggccggcgatatttttgataccggcacaccgccaagttatgcgcgg
gaactttatcatcaacttgtaggtgactttcagggggtgggatgcaccttggtggtgtta
ggcggcaatcatgactcggtgtcggtattaaacgaaagcagggaattgttgtcttaccta
aactgccacgttattgctagtacctatggcaataccgaagcgcaagttttacccttgcgc
acccgaggtggtgaaataggcgcaatattgtgcgctgtaccttttattcgtgctagggat
gttttaaaaagcgaggctggggaatcagcgattgaaaaacgtcaggcgctgggcgaggcc
attaaacagcactatgccaatctttatcaaattgcattagataaacgcagcgtgttgaac
gtcgatgtgcccattattgctaccggacacttaacggcccttggggtaagtcaaagtgaa
agtgtgcgcgacatttatataggaacgctagaaggtttttcagctgaggggtttcctcca
gcagattatatcgcacttgggcacattcaccgcccacaaaaagtggcaggctgcgaccat
attcgatattccggttcgcctattccgttaagcttcgatgaactgaaatcacaaaaacag
gtactaatagccacattcgacaacaaaacgttagtcgaagtagaaagtaagcctattcct
cgttttcaagcgatggcagtgttgcgaggtaatttagaagacattgagcttgccttacag
caaaacgaggcggtaaaaagcgcaagcgctgaacacccagcttggctgtgtattgaagta
gaaactcaagattacttaaccgacctgcaacagcgcattcaagcactaatagacgacaag
cctgccgaaattttgcaattaaagcgaatgcgaaagcaaagagccagcgctatttcagca
gaagaaaacgtcaacttaagtgagttgtctgtacgtgaggtttttgatgcaagactatcg
ttggaagcctttgagtctgacgaagataaacaacgcaaacagcgaattcaaaccctgttc
gaacaggtagtagacgatgtgcagttatcccatgagggcagcgaagatgcagtcgatgcc
aatgcacaggcgaatgaggggaacctatga
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