KEGG   Alteromonas stellipolaris LMG 21861: AVL57_05450
Entry
AVL57_05450       CDS       T04545                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
asq  Alteromonas stellipolaris LMG 21861
Brite
KEGG Orthology (KO) [BR:asq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asq03400]
    AVL57_05450
DNA repair and recombination proteins [BR:asq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AVL57_05450
    Archaeal homologous recombinant proteins
     AVL57_05450
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 SMC_N AAA_21 ABC_tran cobW AAA_22 nSTAND3 NTPase_1 AAA_25
Other DBs
NCBI-ProteinID: AMJ73467
LinkDB
Position
1029190..1032861
AA seq 1223 aa
MKILTLRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LGTISATSNDIMTRGTSECLAEVEFDIKGKAYRAFWSMRRARGKADGNLQSADVELAEVE
SGKVLATQVRPKSEEIERLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTE
IYGQLSQAIHEKYKAAETTKREFKLKLEGVALLSEAQHNELSAQLDQFKTQLLTINTEIV
SLQERHRWQQACEQNQHELTKANAALVEANSVYEQAKDELALLVAGEPAELLRLPHSALS
QLCEDVQRIAKNLTLKQQQLPDLESQQQTRQAEFENSETNFATAKAHQQRFETLINEQII
PIDTEINKLSNRIETNQQSLADAKFKQGKAQESHQAYYDELEGKKRMLDELTTYLNANAA
NGKMAGEISGWKEKAARFSDDENTLAELTQKITTTQQLKDSAEADLTEKQHYKTNVVLLH
QQSADNVSQCEANLNQLLSNGDAASVNADITALNNNWPVLASCEQWQRLYISHTNSHADK
AKRLTTLLSSIETLKQERAELAASYKATQSHLKDVESLIKLDAELAHLRQALSPGDACPL
CGATEHDASLMNIDVPETIAKRDELTRTLENIEKLGTQKREQISTAEFEKQQCEKVVAEA
KTAFSQLEADWQQAMLTLNARVEISDIESFNQLQLSCKERQSRLSAQLSNIQASEAKLAD
AKNDTLLHQQQIDSINSEIALLTAKTSQLEGQLHDLNNTKSKVESALVNNRRTLINEIER
VGLTPDANITKWLTQKHNDVEAFQEKTHLHNSLSHELKALESKLVELSEAKASADKETQL
YSTRIQETEAKREVLLTKRHALFPEADIGAARREIQNTLSAKEQIFKKCDTHLREAQRAL
ENATAQLKVLTVELEEKQQAKQVKQVAFDTALQQSPFADETEFLNALLPYEERQRLLQKK
QLIEREQQNAQLLLGNVTQKHNTLLAHERASEWQQSTVEATQVSLNQKGEEKDRLLAQQG
QLFQQLESNRQAVEKQQSLINEMREFETSYDDITYLHSLIGSASGDKFRRFAQGLTLDNL
VRLANQQLDRLHGRYQLTRNTKDSLGLSVLDTWQGDVVRDTKTLSGGESFLVSLALALAL
SDLVSFKTSIDSLFLDEGFGTLDAETLDVALDALDNLNASGKMIGVISHIEAMKERIPTQ
LKVIKRNGVGLSALEKCYSATEI
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgaaaattcttaccctcaggcttaaaaatttaaatgccttaaaaggagagtggaagata
gatttcacccaatctcctttcatcgacaacggcttgtttgccattaccggtcctactgga
gcgggtaaaacaacgttacttgatgctatttgtttagcgctctatcaccaaacgccacgc
ttgggcactatttcggccacctcgaacgatattatgactcgcggcacgtcagagtgcttg
gcagaagttgagttcgatataaagggcaaagcgtatcgcgcattttggagtatgcggcgc
gctagaggaaaagctgacggcaatttgcaatctgccgatgtggaattagcagaagtagaa
tctggtaaagtattggccactcaggtgagacctaagagcgaagagatagagcgccttact
gggcttaactttgcgcgctttacaaaatcgatgatgctatctcaaggtgatttcgctgcc
tttttaaatgcaaacgaaggcgacagggctgaattactagaagagcttaccggcactgag
atttatggccagttatctcaagcaattcacgagaaatataaagcagcagaaacgacaaaa
cgggaattcaagctaaagctagagggcgtagctttgctcagtgaagcgcagcataatgaa
cttagtgcgcagctggaccaattcaaaacccagctcctcactataaatactgagattgtc
tcgcttcaagagcgacatcgatggcaacaggcgtgtgagcaaaatcaacatgagctgact
aaggctaacgcggcattagttgaagcgaatagcgtttatgaacaggcgaaagacgaatta
gcgctattagtggccggcgagccagctgaattacttcgtttgcctcattctgcgcttagt
cagctttgcgaagatgtgcaacgtattgccaaaaatctcaccttgaaacagcagcaatta
cctgacctggaaagccagcagcaaactcggcaggccgaatttgaaaacagcgaaacgaac
tttgcgactgcgaaagcccaccaacagcgttttgaaaccttgatcaatgaacaaatcatt
ccgattgatactgaaatcaataagctttctaatcgtatagagacaaaccagcagtcatta
gcggatgcgaaatttaagcagggcaaggcgcaagaaagtcatcaagcatactatgatgaa
cttgaaggtaaaaagcgcatgctagatgagctaaccacctaccttaatgctaatgcggca
aatggtaaaatggcaggtgaaatcagtggttggaaagaaaaagcggcccgttttagcgat
gacgaaaatacccttgcagaattaacccaaaaaataacaacaacgcagcagcttaaagac
agcgctgaggctgacttaactgagaaacaacactacaaaacgaatgtggtgttgttacat
caacaaagcgcagataacgtttcacagtgtgaggctaacctcaatcaactacttagcaat
ggcgacgcggccagtgttaatgcagatataactgcgctcaataacaactggcctgttctt
gcttcttgcgaacaatggcagcggctttatatcagtcacacaaatagccatgcagacaaa
gccaaaagactaaccaccttgttatcaagtattgaaacccttaaacaagagcgagcagag
ttagcggcaagttataaagcaacgcaaagtcatttaaaagacgttgagtcgttaattaag
ctagatgctgagcttgctcatttgcgtcaagcgctctcgccaggcgatgcgtgccccttg
tgcggtgcaactgagcacgatgcttctttaatgaatatcgatgtgcccgaaactattgct
aagcgcgacgagttaacccgaacacttgagaatattgaaaagttgggtacgcaaaagcga
gagcaaatcagtaccgcagagttcgaaaaacagcagtgcgagaaggtggttgcagaggca
aaaactgccttttctcaactagaagccgactggcagcaggctatgttaacgttaaatgcg
agggttgaaatttcagatattgagtcatttaaccagcttcaacttagctgcaaagaacgt
caatctcgtttaagcgcacagcttagtaatatacaagctagcgaggctaaattggccgat
gccaaaaacgatacgcttttgcatcaacagcaaatagactctattaacagtgagatagcg
cttttaacagcaaaaacatcgcagctggaagggcagctacacgacttaaacaatacaaaa
tctaaagttgaaagtgcacttgtcaataaccgtcgcacacttattaacgagattgaaagg
gtggggttaacaccggatgcaaacataactaagtggcttactcaaaagcacaacgatgtg
gaagcgtttcaagagaaaacccatttacacaatagtttgtctcacgagttaaaagccctt
gaaagcaaattggttgagctaagcgaagctaaagcgtctgcggataaagaaacccagcta
tacagcacgcgtattcaagagactgaagcgaagcgcgaagtgctgcttactaaacgtcat
gctttattccccgaagcagatatcggcgctgctagacgtgaaattcaaaacaccctctcg
gcaaaagagcagatatttaaaaaatgtgatactcaccttcgtgaggcgcaacgagcgtta
gaaaatgctaccgcccagttaaaagtacttactgtagaattagaagagaaacaacaagcc
aaacaagtgaaacaagtcgccttcgataccgcattgcagcaaagcccatttgctgatgaa
accgagtttttaaatgcattattaccctatgaggagcgccagcgtttacttcaaaagaaa
cagttgattgagcgagagcagcagaatgcgcagttgttactgggtaacgtcacgcagaag
cacaacactctattagcacacgaacgcgcctctgaatggcaacaatcgactgttgaagcc
actcaggtcagcttgaatcaaaaaggtgaggaaaaagatcggttacttgcacaacaaggg
caactatttcaacaattagagagtaataggcaggcggttgaaaaacagcaaagcttaatc
aatgaaatgcgtgaatttgaaacttcgtatgatgatattacttatctacactcgcttatt
ggttcagccagtggagataaatttaggcgatttgcgcaaggtttaacgctagataatttg
gttcgacttgccaatcaacagctcgataggttgcacgggcggtatcaacttacccgcaac
acaaaagacagtttaggtttaagtgtattagatacgtggcagggtgatgtggtacgagat
actaaaacgctatcagggggcgaaagttttctggtgagtttagcgctagcgctggcactg
tctgatttagtgagctttaaaacaagcatagattctcttttcctcgatgaaggctttggt
acgctagatgccgaaaccctagacgtagcgttagatgcattagataacctaaatgctagc
ggtaaaatgattggtgttattagccacatagaagcaatgaaagaacgtattcctacccag
ctgaaagtcataaaacgaaatggagtagggttaagtgcgctggaaaaatgttactcagcg
acagaaatttga

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