Alteromonas stellipolaris LMG 21861: AVL57_05450
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Entry
AVL57_05450 CDS
T04545
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
asq
Alteromonas stellipolaris LMG 21861
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_05450
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVL57_05450
Archaeal homologous recombinant proteins
AVL57_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
cobW
AAA_22
nSTAND3
NTPase_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AMJ73467
LinkDB
All DBs
Position
1029190..1032861
Genome browser
AA seq
1223 aa
AA seq
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MKILTLRLKNLNALKGEWKIDFTQSPFIDNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LGTISATSNDIMTRGTSECLAEVEFDIKGKAYRAFWSMRRARGKADGNLQSADVELAEVE
SGKVLATQVRPKSEEIERLTGLNFARFTKSMMLSQGDFAAFLNANEGDRAELLEELTGTE
IYGQLSQAIHEKYKAAETTKREFKLKLEGVALLSEAQHNELSAQLDQFKTQLLTINTEIV
SLQERHRWQQACEQNQHELTKANAALVEANSVYEQAKDELALLVAGEPAELLRLPHSALS
QLCEDVQRIAKNLTLKQQQLPDLESQQQTRQAEFENSETNFATAKAHQQRFETLINEQII
PIDTEINKLSNRIETNQQSLADAKFKQGKAQESHQAYYDELEGKKRMLDELTTYLNANAA
NGKMAGEISGWKEKAARFSDDENTLAELTQKITTTQQLKDSAEADLTEKQHYKTNVVLLH
QQSADNVSQCEANLNQLLSNGDAASVNADITALNNNWPVLASCEQWQRLYISHTNSHADK
AKRLTTLLSSIETLKQERAELAASYKATQSHLKDVESLIKLDAELAHLRQALSPGDACPL
CGATEHDASLMNIDVPETIAKRDELTRTLENIEKLGTQKREQISTAEFEKQQCEKVVAEA
KTAFSQLEADWQQAMLTLNARVEISDIESFNQLQLSCKERQSRLSAQLSNIQASEAKLAD
AKNDTLLHQQQIDSINSEIALLTAKTSQLEGQLHDLNNTKSKVESALVNNRRTLINEIER
VGLTPDANITKWLTQKHNDVEAFQEKTHLHNSLSHELKALESKLVELSEAKASADKETQL
YSTRIQETEAKREVLLTKRHALFPEADIGAARREIQNTLSAKEQIFKKCDTHLREAQRAL
ENATAQLKVLTVELEEKQQAKQVKQVAFDTALQQSPFADETEFLNALLPYEERQRLLQKK
QLIEREQQNAQLLLGNVTQKHNTLLAHERASEWQQSTVEATQVSLNQKGEEKDRLLAQQG
QLFQQLESNRQAVEKQQSLINEMREFETSYDDITYLHSLIGSASGDKFRRFAQGLTLDNL
VRLANQQLDRLHGRYQLTRNTKDSLGLSVLDTWQGDVVRDTKTLSGGESFLVSLALALAL
SDLVSFKTSIDSLFLDEGFGTLDAETLDVALDALDNLNASGKMIGVISHIEAMKERIPTQ
LKVIKRNGVGLSALEKCYSATEI
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcttaccctcaggcttaaaaatttaaatgccttaaaaggagagtggaagata
gatttcacccaatctcctttcatcgacaacggcttgtttgccattaccggtcctactgga
gcgggtaaaacaacgttacttgatgctatttgtttagcgctctatcaccaaacgccacgc
ttgggcactatttcggccacctcgaacgatattatgactcgcggcacgtcagagtgcttg
gcagaagttgagttcgatataaagggcaaagcgtatcgcgcattttggagtatgcggcgc
gctagaggaaaagctgacggcaatttgcaatctgccgatgtggaattagcagaagtagaa
tctggtaaagtattggccactcaggtgagacctaagagcgaagagatagagcgccttact
gggcttaactttgcgcgctttacaaaatcgatgatgctatctcaaggtgatttcgctgcc
tttttaaatgcaaacgaaggcgacagggctgaattactagaagagcttaccggcactgag
atttatggccagttatctcaagcaattcacgagaaatataaagcagcagaaacgacaaaa
cgggaattcaagctaaagctagagggcgtagctttgctcagtgaagcgcagcataatgaa
cttagtgcgcagctggaccaattcaaaacccagctcctcactataaatactgagattgtc
tcgcttcaagagcgacatcgatggcaacaggcgtgtgagcaaaatcaacatgagctgact
aaggctaacgcggcattagttgaagcgaatagcgtttatgaacaggcgaaagacgaatta
gcgctattagtggccggcgagccagctgaattacttcgtttgcctcattctgcgcttagt
cagctttgcgaagatgtgcaacgtattgccaaaaatctcaccttgaaacagcagcaatta
cctgacctggaaagccagcagcaaactcggcaggccgaatttgaaaacagcgaaacgaac
tttgcgactgcgaaagcccaccaacagcgttttgaaaccttgatcaatgaacaaatcatt
ccgattgatactgaaatcaataagctttctaatcgtatagagacaaaccagcagtcatta
gcggatgcgaaatttaagcagggcaaggcgcaagaaagtcatcaagcatactatgatgaa
cttgaaggtaaaaagcgcatgctagatgagctaaccacctaccttaatgctaatgcggca
aatggtaaaatggcaggtgaaatcagtggttggaaagaaaaagcggcccgttttagcgat
gacgaaaatacccttgcagaattaacccaaaaaataacaacaacgcagcagcttaaagac
agcgctgaggctgacttaactgagaaacaacactacaaaacgaatgtggtgttgttacat
caacaaagcgcagataacgtttcacagtgtgaggctaacctcaatcaactacttagcaat
ggcgacgcggccagtgttaatgcagatataactgcgctcaataacaactggcctgttctt
gcttcttgcgaacaatggcagcggctttatatcagtcacacaaatagccatgcagacaaa
gccaaaagactaaccaccttgttatcaagtattgaaacccttaaacaagagcgagcagag
ttagcggcaagttataaagcaacgcaaagtcatttaaaagacgttgagtcgttaattaag
ctagatgctgagcttgctcatttgcgtcaagcgctctcgccaggcgatgcgtgccccttg
tgcggtgcaactgagcacgatgcttctttaatgaatatcgatgtgcccgaaactattgct
aagcgcgacgagttaacccgaacacttgagaatattgaaaagttgggtacgcaaaagcga
gagcaaatcagtaccgcagagttcgaaaaacagcagtgcgagaaggtggttgcagaggca
aaaactgccttttctcaactagaagccgactggcagcaggctatgttaacgttaaatgcg
agggttgaaatttcagatattgagtcatttaaccagcttcaacttagctgcaaagaacgt
caatctcgtttaagcgcacagcttagtaatatacaagctagcgaggctaaattggccgat
gccaaaaacgatacgcttttgcatcaacagcaaatagactctattaacagtgagatagcg
cttttaacagcaaaaacatcgcagctggaagggcagctacacgacttaaacaatacaaaa
tctaaagttgaaagtgcacttgtcaataaccgtcgcacacttattaacgagattgaaagg
gtggggttaacaccggatgcaaacataactaagtggcttactcaaaagcacaacgatgtg
gaagcgtttcaagagaaaacccatttacacaatagtttgtctcacgagttaaaagccctt
gaaagcaaattggttgagctaagcgaagctaaagcgtctgcggataaagaaacccagcta
tacagcacgcgtattcaagagactgaagcgaagcgcgaagtgctgcttactaaacgtcat
gctttattccccgaagcagatatcggcgctgctagacgtgaaattcaaaacaccctctcg
gcaaaagagcagatatttaaaaaatgtgatactcaccttcgtgaggcgcaacgagcgtta
gaaaatgctaccgcccagttaaaagtacttactgtagaattagaagagaaacaacaagcc
aaacaagtgaaacaagtcgccttcgataccgcattgcagcaaagcccatttgctgatgaa
accgagtttttaaatgcattattaccctatgaggagcgccagcgtttacttcaaaagaaa
cagttgattgagcgagagcagcagaatgcgcagttgttactgggtaacgtcacgcagaag
cacaacactctattagcacacgaacgcgcctctgaatggcaacaatcgactgttgaagcc
actcaggtcagcttgaatcaaaaaggtgaggaaaaagatcggttacttgcacaacaaggg
caactatttcaacaattagagagtaataggcaggcggttgaaaaacagcaaagcttaatc
aatgaaatgcgtgaatttgaaacttcgtatgatgatattacttatctacactcgcttatt
ggttcagccagtggagataaatttaggcgatttgcgcaaggtttaacgctagataatttg
gttcgacttgccaatcaacagctcgataggttgcacgggcggtatcaacttacccgcaac
acaaaagacagtttaggtttaagtgtattagatacgtggcagggtgatgtggtacgagat
actaaaacgctatcagggggcgaaagttttctggtgagtttagcgctagcgctggcactg
tctgatttagtgagctttaaaacaagcatagattctcttttcctcgatgaaggctttggt
acgctagatgccgaaaccctagacgtagcgttagatgcattagataacctaaatgctagc
ggtaaaatgattggtgttattagccacatagaagcaatgaaagaacgtattcctacccag
ctgaaagtcataaaacgaaatggagtagggttaagtgcgctggaaaaatgttactcagcg
acagaaatttga
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