Alteromonas stellipolaris LMG 21861: AVL57_06355
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Entry
AVL57_06355 CDS
T04545
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_06355
Enzymes [BR:
asq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AVL57_06355
DNA repair and recombination proteins [BR:
asq03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AVL57_06355
Prokaryotic type
AVL57_06355
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AMJ73628
UniProt:
A0ABN4LJZ8
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All DBs
Position
1266170..1267615
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AA seq
481 aa
AA seq
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MTVPVSIMWFRQDLRVKDNPALNAACDEGKIIPIYIYDDNAPDGRALGGASNWWLHHSLN
SLNDRLNGHLKVFKGDPKALIPALMEAYEAKGIYWNRCYEPWQINRDKAIKKQLLDNEFE
AHSSNGSLLWEPMKVLKKDGTPYRVFTPYYRKGCLNVEPPRYPQAPPARITYADVDDSKN
SKTYRPCGIDALNLLPSLDWDSEFKNHWKPGEDGAADNLQNFIEHSARKYKDARDIPSMN
GTSHLSPHLHFGEVSPNQAWYAIKDRFETTEDKSIDTYLSELGWREFSYYLLYHFPTIPN
KNFNDKFDKFNWRRDAKSLKAWQKGQTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKN
LLISWHEGERWFWDCLVDADLASNTAGWQWVAGTGADAAPYFRIFNPLLQGEKFDKQGKY
VRKYCPELADLPDKYIHKPWDAPPVIAKDAGVHLGDNYPKPIVDLKASRQRALDAFQALK
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgacagtgccagtgtcgataatgtggttcagacaggaccttagagtaaaagataacccc
gcgttaaatgcagcctgtgatgagggaaaaataatcccgatttacatttacgatgacaat
gcacctgatggtagagcattgggaggcgcaagcaattggtggttacatcattcgttgaat
tcattgaacgacagattaaacggtcatttaaaagtattcaaaggcgatcctaaagcgctt
atccccgcattaatggaagcctatgaagcgaaaggcatctattggaatcggtgttatgag
ccttggcaaattaatcgagataaagccattaaaaagcagctcttagataatgaatttgag
gcgcatagtagtaatggtagtttgctgtgggaaccgatgaaggtgctaaaaaaagacggc
actccataccgagttttcaccccgtattatcgaaaaggttgtttaaacgttgagcctcca
cgctaccctcaggcgccgccagctcgcattacatacgccgatgtggatgatagtaagaac
agtaaaacttaccgcccttgcggtatagatgcactgaacttacttccatcacttgattgg
gacagtgaatttaagaatcactggaaaccgggtgaagacggtgcggctgacaatttacag
aatttcattgagcactctgcgcgtaaatataaagatgcgcgagatattccatcaatgaat
ggaacgtctcatctgtcacctcatctgcactttggcgaggtatcgcctaatcaagcgtgg
tatgccattaaagatagatttgaaaccactgaagataaaagcatagacacgtacttaagt
gaattaggctggcgcgagttcagttactatttgctgtaccattttccaaccataccgaat
aaaaacttcaacgataagtttgataaattcaattggcgacgtgatgccaaatctcttaaa
gcctggcaaaaagggcaaaccggtattcctattgtggatgcgggcatgcgcgagttatgg
caaacggggtatatgcacaatcgcgttcgtatgattgtaggctcgttcttagtcaaaaac
ctgcttataagctggcacgaaggcgagcgctggttttgggattgccttgtagacgctgat
ttagccagcaataccgcaggttggcaatgggtagcaggcaccggcgctgacgctgcaccg
tatttcagaatttttaacccattactacaaggcgagaaattcgataaacaaggcaaatac
gtaagaaagtactgccctgaacttgccgaccttcccgataagtacatacacaaaccttgg
gatgcaccaccggttattgctaaagatgctggtgtccatttaggtgataattatcctaaa
cccattgtagatttaaaagcatcgaggcagcgtgcccttgacgcatttcaagctttgaaa
gagtag
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