Alteromonas stellipolaris LMG 21861: AVL57_08255
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Entry
AVL57_08255 CDS
T04545
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
AVL57_08255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_08255
Enzymes [BR:
asq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
AVL57_08255
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
AVL57_08255
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVL57_08255
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AVL57_08255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMJ73970
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All DBs
Position
1678446..1679879
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AA seq
477 aa
AA seq
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MHEPSFLWYDFETFGTSGQKDLPCQFAAIRTDLDFNIIGKPINIMSAIANDYLPHPEACL
VTGITPQQTLRDGSNEADFAKRIYEEMSTPNTCSLGFNSIRFDDEVARFLFYRNFYDPYS
REWRNGNSRWDIIDLARACYALRPDGINWPAREDGTPSFKLEHLTKENGISHENAHDALS
DVHATIALAKLIKEKQPRLFEYAYSLRSKHNVANQFDLTKPSVLLHISAKLPASQGCCTW
IMPVAKHPTNSNAIIAVDLSKPIDSLLNDSPEEIKAKLYARYEPGSDANSLRPGLKLIHI
NRSPFVTTAKAMTEDNAHRLGLDRDACLENYRILAQERDLGMKLSKVYENDADDKEQDID
HALYSGGFLSTEDRHWCDKVLESSPEQLGALSEDTQHVGLRALLFRYRARNYPSTLTYDE
TLKWQRHRQERLTDSTSPASITLEHYMSTLERLAHEHVDNPEKQAILRALFQYAENL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaacctagctttctttggtacgatttcgaaacgttcggtaccagtggtcaaaaa
gatttaccttgtcagttcgccgctattagaaccgatctggattttaatattattggtaag
cccattaatatcatgagcgccatcgctaacgattacttgccccaccctgaagcctgtttg
gttaccggcattacgcctcaacaaaccttacgtgacggctcgaacgaagctgattttgcc
aaacgtatttatgaagaaatgtcgacccccaacacctgtagtttggggtttaatagcata
cgcttcgatgatgaagtcgctcgtttcttgttttaccgaaacttctatgacccttattcc
agagaatggcgaaatggaaatagccgatgggatattatagatttagcgcgagcatgctat
gcacttcgccctgatggcataaactggccagctcgtgaagatggtacgcctagcttcaag
ctagaacacttaaccaaagaaaacggcataagtcatgagaacgctcacgatgcattaagt
gacgttcacgccactatcgccttagcaaagctcattaaagaaaagcagcctagattattc
gaatacgcttattcgcttcgtagtaagcataatgtggctaaccagtttgatttaactaag
ccttccgttttgttgcatatttcagctaagttgcctgctagccaagggtgttgtacgtgg
ataatgcctgttgctaaacaccctaccaacagtaacgcaattattgccgtagacttgtca
aagcctatcgatagcttacttaacgattctcctgaagagataaaagccaaactttacgcg
cgctatgagcctggcagtgatgccaatagtttgcgccctgggttgaagctcattcatatt
aaccgctctccttttgtgactactgcaaaagcaatgacagaagataacgcgcatagatta
gggttagacagagatgcctgccttgaaaattaccgtattttggcgcaagagcgtgactta
ggcatgaagttgtcaaaagtgtatgaaaacgacgcagatgataaagagcaagatatcgat
catgccctttatagcggaggttttttaagtactgaagatcgccattggtgcgataaagta
ctggaatcaagcccagaacaacttggcgccttatctgaagacactcagcatgtaggcctt
agggctttattgtttagatatagagcgcgtaattacccgtcaacacttacctatgatgaa
acgctgaagtggcaacgacatcgacaagagcgtttaaccgactccacttcaccagcatcg
attacgcttgagcattatatgagcacgttagaacgccttgcccatgaacatgttgataat
cccgaaaaacaagcgatattaagagcattatttcaatatgccgaaaacctttga
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