Alteromonas stellipolaris LMG 21861: AVL57_11260
Help
Entry
AVL57_11260 CDS
T04545
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AVL57_11260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
asq02000
]
AVL57_11260
02044 Secretion system [BR:
asq02044
]
AVL57_11260
Transporters [BR:
asq02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
AVL57_11260
Secretion system [BR:
asq02044
]
Type I secretion system
Adhesin protein transporter
AVL57_11260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
FtsK_SpoIIIE
DUF3584
DUF87
AAA_29
RsgA_GTPase
nSTAND3
AAA_10
AAA_23
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AMJ76396
LinkDB
All DBs
Position
complement(2359286..2361385)
Genome browser
AA seq
699 aa
AA seq
DB search
MDCLMIICRAHNISVSRVSLLSGLPLDNGELSPTGFERAAQRAGLASRTAKRDITQINAA
LLPAVLIMEGRQACVLHELTDDSAKVSYPELGTAVVSVERGQIASQFTGYIIFARPVAQS
ETPSGKVEKSAVGHWLWSSVKSAYDLYRDVLLASIFISLLSIALPLFVMNVYDRVVPNAA
METLWALAIGVLLVLAADFLLRVLRQYFVELAASRLDVTMSAKIMEKVLSIDLTNRPAKS
GAFINSLQSFESIRHFFGSLTLVALVDLPFGLLFVFIIAMIDIYLVIPILLGTTILFLYA
LKAQRVMRSLSEESMEISARKSSLITESVTALEDLKAFGYQSRTQSAWEKQTIFLAKVNA
KLRLVSMSVNNSALWIQQSVGVVIILTGVYLIIEGEITQGGLIAAYLLSSRAMGPVSQAA
ALLAQYHQAETAKNALDDIMSLPSEGGDNKQVKNASQLSGNLDVKQLCFRYPNENVLALK
DINFSIKQGEHVAILGKNGCGKSTLNRLLMGFYKAESGQVLLDEIDMKQYDPVLLRQNIG
YVPQDVNLFSGTLKENILPAHRGVDDERLWEIAKQCGLAKVVNSHGNGFEQQVGEGGKQL
SGGQRQSVSLARALIYNPAIFIMDEPTSAMDSANEAMMKETIREAIKGKTFILNTHRTTL
LDLVDRVIVIESGKVIADGKKEDVLPQFKPVPSKQRTAQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggattgcttgatgattatttgtcgagcacacaatatttcggtttctagggtaagccta
ctcagtggtttgcctctagataatggtgagttatctcccacgggcttcgagcgtgccgcc
caacgtgctggtttagcaagtcgtactgcaaaaagagacattacgcagattaatgctgct
ttgcttcccgccgtgttaattatggaaggcagacaagcctgcgtcttacacgaattaacc
gatgatagtgcgaaagtgtcctatccagagctaggtaccgctgtggtatcggtagaacgt
ggacaaatcgcctcgcagtttaccggctacataattttcgcgcgtcctgttgcccaatct
gaaacgccttctggcaaggttgaaaaaagcgctgtcggtcattggctttggtcatcagta
aaatctgcgtatgacttgtatcgtgatgttctactggcatcaatattcattagcctgtta
tcgatagcgctaccgctatttgtgatgaatgtatatgatcgggtagtgcccaacgcggcg
atggagacattgtgggcgctagccatcggcgtgcttttagtattagcggcagattttctc
ttacgtgtcttgcgacaatattttgtagagcttgccgctagtcgcttagacgtcaccatg
tctgcaaaaattatggagaaagtactttcaatcgatttaaccaataggcccgccaaaagt
ggtgcgtttattaatagcctgcaatcttttgagagtattcgtcacttctttggttcactg
accttggtcgccttggttgatttgccttttggtttactgtttgtgtttatcattgcgatg
atagatatctatctagtcattccaattttattgggcacaactattctctttctatatgcc
ctaaaagcacagcgagtcatgcgctcattgtctgaagagtcgatggagattagcgccaga
aaaagttcattaattactgaaagtgttacggcacttgaagatttaaaagcctttggatat
caaagccgaacgcaaagtgcatgggaaaagcaaaccatcttcttagccaaagtgaatgct
aaactacgtttagtttctatgtcggttaacaactctgcactgtggattcagcaatccgtc
ggtgtagtgataattcttaccggtgtgtacctcattattgaaggtgaaattacccaaggt
gggctaatagcggcgtacttactttcgagtcgggctatggggcctgtatctcaagccgct
gcgcttttagctcagtatcatcaagctgaaactgcgaaaaatgcgttagacgatatcatg
tcactgccatcagaaggtggtgacaacaagcaagttaaaaacgccagccagttaagcgga
aaccttgatgttaagcagctttgctttcgctaccctaatgaaaacgtcttggcacttaaa
gatataaacttttcaattaagcaaggtgagcacgttgccattttggggaagaatggctgc
ggtaaatctacattaaatcgattactgatggggttctataaagccgaatcgggtcaagtg
ttactcgatgaaattgacatgaagcaatacgatcctgtccttcttaggcaaaacataggc
tatgtgccgcaagatgtgaatcttttctctggcacactaaaagagaatatattgccggca
catcgaggggtagatgacgagaggctatgggaaattgctaagcaatgtggcttagcgaaa
gtcgttaatagtcacggaaacggttttgaacagcaagttggggaaggggggaagcaattg
tcaggtgggcaacgtcaatctgtttcactggcccgtgcactgatttacaaccccgcgata
ttcattatggacgaacctacttctgccatggattcagcgaatgaagccatgatgaaagaa
acgattcgagaagcgattaaaggcaaaacatttatcctcaatacccatcgcactacgttg
ctggatttagtcgacagagtcattgttatcgaaagcggaaaagtaatagctgatggtaaa
aaagaggacgttttacctcagtttaagccggtaccttctaaacaaaggacggcacaatga
DBGET
integrated database retrieval system
