Alteromonas stellipolaris LMG 21861: AVL57_11350
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Entry
AVL57_11350 CDS
T04545
Name
(GenBank) 23S rRNA pseudouridine synthase F
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asq03009
]
AVL57_11350
Enzymes [BR:
asq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
AVL57_11350
Ribosome biogenesis [BR:
asq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AVL57_11350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
BChl_A
Motif
Other DBs
NCBI-ProteinID:
AMJ74509
UniProt:
A0AAW7Z1G8
LinkDB
All DBs
Position
complement(2375212..2375952)
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AA seq
246 aa
AA seq
DB search
MTSEVTKRLNKYISDTGLCSRREADKLIEQNRVTINDKLPELGTKVAQGDQVKVDGKLVK
AVAEDKSDRIYLVYNKPIGITCTTERHVKGNIIDAIKHKQRIFPVGRLDKPSEGLIILTS
DGDIVNKILRAENAHDKEYEVTVNQPISERFVQKMAKGVPILGTVTKPCKVNARGKFQFS
IILTQGLNRQIRRMCEFLGYEVTKLKRTRIMHLELGNLKPGQWRNLTEKELNQLNSAVQK
SSKTAG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgaggtaacaaagcgtcttaataaatatatcagtgatactggactgtgctca
cgacgtgaagctgataaattgattgagcaaaatcgggttaccattaacgataagctgcct
gaactgggtactaaagtagcgcagggcgatcaggtgaaggttgatggtaagcttgttaaa
gccgtggccgaagacaaatcagaccgcatttacttggtatacaacaagcccattggcatt
acctgtaccaccgagcgccatgtaaaaggtaatattatcgatgccattaagcacaaacaa
agaatcttcccagtaggcagacttgataagccatcagaaggattgattattctgaccagt
gacggcgatattgtgaataaaattttgcgtgctgaaaatgcccacgataaagaatacgaa
gttaccgttaaccaacccattagtgaacgttttgttcaaaaaatggcaaaaggcgtaccg
attttaggcaccgtgactaaaccgtgtaaggtaaatgcacgtggcaagtttcagttttca
attattctaacccaaggcctaaaccgacaaatcaggcgcatgtgcgaatttctcggctac
gaagtgactaaactgaaacgcacacgcatcatgcacttagagctaggtaatttaaaacca
ggccaatggcgtaaccttacggaaaaagagctaaatcaactgaatagcgctgtgcaaaaa
tcatctaaaaccgcagggtag
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