Alteromonas stellipolaris LMG 21861: AVL57_12630
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Entry
AVL57_12630 CDS
T04545
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AVL57_12630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_12630
Enzymes [BR:
asq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AVL57_12630
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVL57_12630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AMJ74730
LinkDB
All DBs
Position
complement(2680306..2683926)
Genome browser
AA seq
1206 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLIKHQPNGVFTPETILVESPGMQHWVSMQLAKEQGVAMNLD
FPLPVRFMWNTARLVLGKDKVPKQSPYRREVLAWRIDALLLEAAGKETSLQSTAAFEQVN
KYWLQAGSVQEQGVQRLQLATALADVYEQYLLYRPDWLFAWEENQRKTNDESEIWQSEIW
RHLSKQEPLHPARLHQLTLTALNSGDHLESGVSELPSRIVVFAINTMAPQLIAFFDALAV
HIDIHIFHLNPSVNYWGDAKSDSELARQLRMDGLEKWMQTNQSNPLLGNLGQQGRELFNL
LTDLDTFEVSAFDAPIPADSESGEILLLNQIHNDILEALPATPFTSIKSTDADPCENADD
SVTIMCTHSALREVQVLHDHLLHWLSQDASRTPSDVLVMCPAIENYAPFVDTVFHRVGTK
PLGGNGPVRLPCTIADRSPMDAEPLIAAYMTLLHLPDSRFGVSDIVDYLQLDAVQKRFSI
AQDDIDQMTVWLKQAHIHWGLDGSHKANVSAGATHENTYSWWWGIRRLLLGMLAPDSEGI
IDDMLTIPDVEGQSTVTLGKLIHVIELLGRFATELNTPRSPNAWGADLLALRDTCFTPTK
EQEHSWDLIAKVAADLAARCEEAGYTYDLSLRQVRELLLSRFSSPDAGNHFMTGQVTVCS
MLPMRSIPFKKVCILGLNDSEFPRKSTPLGLDLMAGPDRRVGDRSRRLEDRYLFLEAIIS
ARESLYLSYQGNDVKNNSERQPSLVLGEFLDMLDTGYQVNIGHYLKHAPLHPFSESAFTG
ALPSYETGWLRLAQSLRDAVSPAPETESSSIDGNKKGREGGKKGSEIQSSLAPLAVDSTP
ENTSFQCMQVARAFRDPLEFFSQQRLGVNLSQSFTLLDNSEPFETNALVRYQVLDAMFSS
SASFDDANAATLQHSDRVVQFAALRGDIPNNPVAQEELELWKESAVALTQAMGPHDAEPK
RAQFAGNHFTFTASALEGGSSLMQPCAGKVNDIRALGYFMTQLVFSASDDVTPHTQYPLD
IFYCDWVKGETKLMKRTFPAVDKNTARQVLLSIESLFVGILSAPTPAYSSLMSAVVSGTK
KSPGTLLANKVTLPIFLASLEANSKIDAEFEDGAQGGGIQFDSDTEDTEEVGKSLIPDIC
AFFASEDAQRILKNWLQSSGQFTADIASNPYVKWLFPDGVSWHDMPTTQAFLLFALVVNI
SSEEQL
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgcgctttatccatcgaacaaacttgaacacctcagcttccttcttactacgcta
attaagcatcaacccaatggcgttttcacccctgaaaccatactggtagaaagcccaggc
atgcagcattgggtaagtatgcaacttgctaaagagcaaggcgtggcgatgaaccttgat
tttcctttaccagttcgctttatgtggaacacggcaaggttagtgttgggtaaagataaa
gtacctaagcagtcgccttaccgacgtgaagtgcttgcatggcgcattgatgcactttta
ctagaagcggcgggaaaagaaacatcgctacaatctacagcagcgttcgagcaggttaat
aaatactggttacaagcgggcagtgtgcaagagcaaggtgtacaacgactgcaattagca
accgcattagccgatgtgtacgagcagtatttgttatatcgtccagattggttgtttgcg
tgggaagaaaaccagcgcaaaacgaatgatgagtctgaaatttggcaaagtgaaatatgg
cgtcatctatccaagcaagaacctttgcacccagcaagactgcaccaacttacccttacc
gcgttaaatagcggcgatcatcttgaaagcggcgttagcgaattacccagccgtattgtg
gtgtttgctattaacaccatggcgccgcagttgattgcttttttcgatgcgttagcggtg
cacatcgatattcatatttttcatttgaaccccagtgttaattattggggcgatgcgaaa
agcgatagcgaactagcaaggcagctgcgcatggacgggctagagaaatggatgcagacg
aatcaaagtaacccgttattaggtaatttgggtcagcagggcagagagcttttcaatctg
ctcaccgatttagacacctttgaagtcagtgccttcgacgcgcccattccagctgacagt
gaaagcggtgaaatcttattactaaaccaaattcataacgatatattagaagcgttaccg
gctacgcctttcaccagtataaaaagcacagatgcagacccctgtgaaaacgctgatgac
agtgtgaccattatgtgtacccattcagcgctacgtgaagtacaggtgctgcacgatcat
ttactgcactggttatcgcaagatgcatcaagaacgccatctgatgtgctggtgatgtgc
cccgcgatagaaaactatgccccttttgtagacacggtatttcatcgggtgggaactaaa
ccgctaggaggcaatgggccagtgcgcttgccatgtactattgccgatagaagccccatg
gatgctgagcctcttattgccgcttacatgacactccttcatttgcctgatagtcgtttt
ggcgtatcagatattgtcgattacttgcaacttgatgcggtacaaaaacgctttagtatt
gcacaagatgatattgaccaaatgacagtatggcttaagcaagctcatattcactggggg
ttagacggcagccacaaagccaatgtatcggcaggagccacccatgaaaacacctacagc
tggtggtggggaattaggcgtttattgttaggtatgttagcgccagatagcgaaggtatt
atcgatgacatgcttaccattcccgatgtggaaggtcagtcgacggtaaccctaggtaag
ctaatccatgttattgagctacttggtagatttgccactgagcttaataccccacgaagc
ccgaatgcgtggggggccgatttattagcactgcgtgatacctgctttacccctaccaaa
gagcaagaacacagctgggaccttattgctaaagtggccgctgatttggcagctcgatgt
gaagaagcaggttatacctacgatttaagtttacgtcaggtgagggaattactgctaagt
cgtttctcatctcctgatgcaggtaaccactttatgacggggcaagtgacggtatgttcc
atgctgccaatgcgtagtatcccgtttaaaaaagtctgtatattagggcttaacgacagc
gagtttcctcgtaagtctacacccttaggtctcgatttaatggcggggcctgatagaaga
gtaggtgaccgttcccgtcgtttagaagacagatacctctttttagaagcgattatttcg
gccagagaaagcttgtatttaagctaccaaggtaacgatgtaaaaaataacagtgagcgc
caacctagcttagtgttaggtgaatttctggatatgttagacacgggctatcaggtaaac
attggccattatttaaagcatgcgccattacacccgttcagtgaaagcgcgtttactggc
gcactccccagctatgaaacgggctggttacgcctagcccaatcactacgtgatgctgtt
tcgcctgcccccgaaaccgaaagctctagcattgatggcaacaaaaaaggcagagaaggc
ggtaaaaaaggcagcgaaatacaaagttcactcgcgcctttagcggtagacagcacacct
gaaaacaccagctttcagtgtatgcaggtggcacgcgcgtttcgcgatccactagagttc
ttttcacagcagcgattaggggtaaacttatcccagtcattcaccttactagacaatagc
gaaccttttgaaacaaatgcgctagtacggtatcaagtactcgacgcaatgttttcttca
agtgcttcatttgatgatgcgaatgcggcaactcttcagcacagcgatagagtagttcaa
ttcgccgcgcttcgtggtgacattcctaataaccctgtagctcaagaagagctagagctg
tggaaggagagcgcggtagctcttacccaagcgatggggcctcatgatgccgaaccgaaa
agagcgcaatttgcaggcaaccactttacctttactgccagtgcgcttgaaggcggaagc
agcttaatgcagccgtgcgcaggtaaggtgaatgatataagagccttaggttactttatg
acccagcttgtgtttagtgcaagcgatgatgtaacaccccatactcaatatccgctagat
atcttttactgcgattgggtaaaaggtgaaactaagctaatgaagcgcacgtttccagca
gtggacaagaatactgcccgccaagttttgttaagtattgaatcattattcgttggcata
ttaagtgcccctacgccagcgtatagctcattaatgagtgctgtagtaagtggtactaag
aaatcacctggcacccttttggcaaacaaagtcaccttacccatatttctggctagcctt
gaggctaattcaaagattgatgctgaatttgaagacggtgctcaaggtggtggtattcaa
tttgatagtgataccgaagatacagaagaagtcggcaagtccctcatacctgatatatgc
gcattttttgccagtgaagatgcccagcgcatacttaaaaattggctacagtcatcgggg
caatttaccgctgatatcgcgagtaacccttatgttaaatggttatttcccgatggcgtg
agttggcatgatatgccaactacacaggcttttttattgtttgctttggtcgttaacatt
tcatcagaggagcagttatga
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