KEGG   Alteromonas stellipolaris LMG 21861: AVL57_12650
Entry
AVL57_12650       CDS       T04545                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
asq  Alteromonas stellipolaris LMG 21861
Pathway
asq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:asq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AVL57_12650
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:asq03019]
    AVL57_12650
Messenger RNA biogenesis [BR:asq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AVL57_12650
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: AMJ76427
UniProt: A0ABN4LT93
LinkDB
Position
complement(2691524..2692825)
AA seq 433 aa
MNLYGHDGKWLMVDCGVSFDEPLIPPYRYTGTKKQTHHRVVAPDPAFIAAQKENIAGIVI
THAHEDHVGALPYLWARFQCPIYTTSFTAEVLRRKLAQTKLANKVPIVEIASEQTLTLGP
FDVSWLSVTHSLPEPYALKIATSAGTVLHTADWKIDAQPITGKPFDSNTYRALGNENILA
MVGDSTNATKPGFSISERNCYDGLLSTVKPLQGRVVVTCFGSNIARLITLARVAQKTGRY
VALYGRSLINMYSIARQQGIWPVDLPVADAFHLGYLPPNEVLGVATGSQGEKNTALSRMA
NDSHPHLQLDKGDTVIYSAIAIPGNEDSIKRVNNVLSARGVKVIMSEESQLPIHASGHPC
AEELKLMYHWVKPQIAIPVHGEEVHLKAHAMIAKECGVKKHYVGQNGDLYRLAPQPSIRR
QVINTGRVPVQQD
NT seq 1302 nt   +upstreamnt  +downstreamnt
ctgaacctgtatgggcatgacggcaaatggttaatggtagattgtggagtgtcgttcgat
gaaccgcttattcctccttatcgctatactggtacaaaaaagcaaacccatcacagggta
gttgcgccagatcccgctttcattgcggcgcaaaaagagaatattgccggcattgttatc
actcatgcgcatgaagatcatgtaggcgcattaccgtatttatgggcacgttttcagtgc
cccatctataccacttcttttactgccgaagtattacgccgtaaacttgcgcaaaccaaa
ttagccaacaaagtacctatagtagagatagcctctgagcaaacgctgacattagggccc
tttgatgtaagctggttatcagtaacccattcgctgcccgaaccttatgcgttaaaaata
gccacgtcagcgggcacggttttacatactgccgactggaaaattgacgcgcagccaatt
accggtaagccttttgacagtaatacctatcgcgcattggggaacgaaaacattcttgcc
atggttggagattcaaccaacgcgacaaaaccaggtttctccatctctgaacgcaattgc
tacgacggtttgttgagcacagttaaaccactgcagggcagagtcgtcgttacctgtttt
ggtagtaatatcgcgcgattaattaccctagctagggtggcccaaaaaaccgggcgttac
gttgctctatacgggcgctctcttatcaatatgtacagcattgcccgccaacaaggaatc
tggcctgtagacttgccagtggcagatgcgtttcatttaggctacttgccaccaaatgaa
gtgctcggtgtggcaacaggcagtcagggggagaaaaataccgccctttctagaatggcc
aacgacagtcaccctcatttacaattagacaaaggcgataccgttatttattccgctatt
gcaataccgggtaacgaagacagcattaagcgagtaaataatgtgcttagtgctagaggc
gtaaaagtaatcatgagtgaagagagtcagctgcctattcatgcaagtggtcacccatgc
gccgaagaactcaaactcatgtaccattgggtgaagccacaaattgctattcctgtgcat
ggcgaagaggtgcaccttaaagctcatgcgatgattgccaaagaatgtggtgtaaaaaaa
cactacgtggggcaaaacggtgacttgtatcggttagctcctcaaccaagcattcgacgg
caagttattaatactgggcgagttcctgttcagcaagattaa

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