Alteromonas stellipolaris LMG 21861: AVL57_16920
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Entry
AVL57_16920 CDS
T04545
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq00040
Pentose and glucuronate interconversions
asq01100
Metabolic pathways
asq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AVL57_16920
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AVL57_16920
Enzymes [BR:
asq01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AVL57_16920
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GFIT
Motif
Pfam:
Pectate_lyase_4
RicinB_lectin_2
Ricin_B_lectin
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AMJ76501
UniProt:
A0AAW7Z283
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All DBs
Position
complement(3680400..3682373)
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AA seq
657 aa
AA seq
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MSGAYGSGFHTQNGGATGGAGGDVVRVTTGKQIHEALCNRNTSETPIIIEVEGTINHGNT
EKVSGSSCNTAEDKIELKDISNVTLIGVGQGALFDELGIHIRNSTNIIIRNVHVRNVKKS
GSPTSNGGDAIGIETDVRNVWVDHVTLEASGGESEGYDGLFDVKDNSKYITLSYSHLLNS
GRGGLVGSSESQVNNGPLTYHHNIFENLNSRVPLVRGATAHIYNNHYDGIESSGINSRAG
AEVKVENNYFEDAKDVLGTFYTTTDGDWQVAGNIFGSGVTWSSSDDDYQPAGPNVVSTTS
VGIPYSYTLDNASCVRNILQQTAGANKNLQVSDGSCGTTGGGDNGGGDNGGGDNGGGDNG
GGDNGGGDNGDTPSGVNLSLSADADGSSKASGTSYGNVKDGDTSTYWSPNGSTGRVSIKG
LDTTINAVRIVERSGAEGRVTSWRLVNNDTGSIITSGNTIPDPITFSDVSLGKLNFVIDS
SSSTPQIAEFEIYFGLDSNGGGSSDGGSNVVNGTVNGIYRITPVHSGRSFDVANCGTTNG
SNIRQWEWLDNDCQKFTISQVDGIWHRISPLNALQQSLEISNNSTSAGENVQLWQYSGGN
NQLFRFQSAGSGKWRIVARNSELCLDIAGQGGGNGANIIQWTCIAQADNQMFELTRQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgcttatggctcgggctttcatacccaaaacgggggtgcgaccggtggcgca
ggaggtgatgtggtacgcgtaacaacgggcaaacagatacatgaggcactctgtaatcgg
aacaccagtgaaacaccgattatcatcgaagtagaaggcactataaatcacggtaatact
gaaaaagtgtcgggaagtagttgcaataccgcagaggataaaattgaattaaaagacatt
agtaacgtaacccttataggggtaggtcaaggtgccttgtttgatgaacttggaatacac
atacggaattctaccaacattattatacgaaatgttcacgttcgaaatgtgaaaaaatcg
ggttcaccaacatctaacggtggcgatgccatcggtattgaaaccgatgtgcgaaacgtg
tgggtagatcacgtaacattagaagcaagtggcggcgaaagcgagggttacgacgggtta
tttgatgtaaaggacaattcaaaatatatcacgctttcgtacagtcatttgctcaactct
ggtcgtgggggattagtaggttcaagcgaatcccaagtcaataatgggccattaacctat
caccataatatttttgagaatttaaactcgcgagtacctctagtgcgaggggccactgcg
catatttacaacaatcattacgacggtattgaatcgtcgggtatcaattcaagagcaggg
gctgaggttaaagttgagaataactattttgaagatgctaaagatgtgttgggaacgttt
tataccacgactgatggcgattggcaggtagccgggaacatttttggaagcggcgtaaca
tggagttcatctgacgatgactatcagccagccggtccgaacgtggtttctaccactagt
gttggcatcccgtattcttatactctcgataatgcctcatgcgtccgcaacatcttgcaa
caaacagctggcgcgaataaaaatttgcaagtatctgacggtagttgtggaactactggc
ggtggtgacaacggcggtggtgacaacggcggtggtgacaacggcggcggtgataacggc
ggcggtgataacggcggcggtgataacggcgatacgccttccggcgttaacctctctctc
tcggccgatgctgatggtagttcaaaagcaagtggtaccagttatggcaacgttaaagat
ggggataccagcacctattggtcacctaacggttcaaccggtcgcgttagtatcaaaggg
ttggacacaaccattaacgcagttcgaattgtagaaagaagtggtgctgaagggcgcgtt
acgtcttggagattggttaataacgacactggttcaatcattacatcaggtaacactatt
cctgatcccataacgttttcagatgtaagcttaggcaaacttaactttgtcattgattca
tcatcatcgacgcctcaaatagctgaattcgaaatttattttgggctagatagtaatgga
gggggcagtagtgatggaggttcaaatgttgtcaatggcacggtgaacggaatctataga
attacccctgtacatagcggacgaagttttgatgtagccaactgcggaactacaaatggt
tcaaatattcgccaatgggaatggttagacaatgattgtcaaaaatttaccatttcgcaa
gtggatggaatttggcaccgtatctcaccattaaacgcattgcagcagagtttagagata
tcaaataactcgacatctgcaggggagaacgttcaattgtggcaatatagtggaggcaat
aatcaactgttccgctttcaatctgccggttcgggtaagtggcgaattgtagcaagaaac
agcgagctatgccttgatatagctgggcagggcgggggtaatggtgccaatataattcag
tggacttgtattgctcaagcagacaatcaaatgtttgaattgactagacagtaa
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