Alteromonas stellipolaris LMG 21861: AVL57_18310
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Entry
AVL57_18310 CDS
T04545
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq03030
DNA replication
asq03430
Mismatch repair
asq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL57_18310
03430 Mismatch repair
AVL57_18310
03440 Homologous recombination
AVL57_18310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
asq03032
]
AVL57_18310
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_18310
Enzymes [BR:
asq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL57_18310
DNA replication proteins [BR:
asq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVL57_18310
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVL57_18310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AMJ75741
UniProt:
A0ABM5YMH6
LinkDB
All DBs
Position
complement(4038950..4039633)
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AA seq
227 aa
AA seq
DB search
MLQWLSDWLFGRGPSSFDRFKSATLQDTTLMSIDLELTSLNANESEITSFGWVCGRNSSI
ALETCTYSVVKTKAPLGQSPVIHGLIQDNISKGEKVEDVLTRFIAQLPSKILVIHNANLD
LAVLDAVFRRLNLPAQEVYYIDTLQLALYELKKEHEVVPSNSASLGACLLRAGLPEVPQH
NALEDAMAALLLCYAQLASLGLTEQSCLADLSHTKALGRKTLGVVKT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaatggctaagtgactggttattcgggcgcggaccatcatcattcgataggttt
aaaagcgcgactttacaagacactactttgatgtctattgatttagagctgacatcctta
aacgccaatgagtcggaaattacatcttttggctgggtgtgtgggcgcaacagtagcatt
gctttagaaacctgcacttatagtgttgttaaaaccaaagcgcctttagggcaaagccca
gttatccatgggctcattcaagacaatatttcaaagggcgaaaaagtagaagatgtgcta
acgagatttatcgcacagttgccttcaaagattctggttatccataatgccaacttagat
ttggcagtacttgatgcggtatttaggcgcttaaacttgccggcacaagaggtttattac
atcgacaccttacaactcgctttgtatgaattgaaaaaagagcatgaagtcgttccatca
aatagcgcatctttaggcgcttgtttactgagagccggtttaccagaggtgcctcaacac
aatgcattagaagatgccatggccgctttactcttgtgctatgcacagctagcgtcatta
gggcttacggaacaaagttgcttggcggacttatcacatactaaagcccttggtaggaaa
acacttggcgtggttaaaacttaa
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