Alteromonas stellipolaris LMG 21861: AVL57_18870
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Entry
AVL57_18870 CDS
T04545
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AVL57_18870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asq03400
]
AVL57_18870
Enzymes [BR:
asq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVL57_18870
DNA repair and recombination proteins [BR:
asq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AVL57_18870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
PriA-like_WH
AAA_30
Zot
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AMJ75843
LinkDB
All DBs
Position
complement(4180799..4183003)
Genome browser
AA seq
734 aa
AA seq
DB search
MVFIQVAVPVPLRQLFTYSHTDTLQSGVRVKVSFGPRQLVGIVIESGIDIDDTSKIKAIN
EVIDSVPVIDESLRKMAHWLWQYYHHAPGEVIHAMLPVPLRKGEPATPSPAQYIQVTPEG
RTTDSDSLSRAPKQMACLEAVVASPLIASEARKTFSPAVVKALIDKALIERVDITPELTA
QAWLDTFDIGEKPVPDKEQGVAIAALNQQHGTFAISLLEGVTGSGKTEVYLQSIEPLLKA
GKQVLILVPEIGLTPQTVSRFEKRFNIPVGVLHSQLTDAARLSVWQRARAGELGIIIGTR
SAIFTPLKNPGMIIVDEEHDESFKQQDGLRYNARDLAAMRAKEHSIPLLLGSATPALETL
NNALTGRFAHLQLTRRAAGAQSTKQYLLDARDQPIHYGISEGLLTIMRQHVNAGNQILVF
VNRRGYAPALLCHHCGTTAMCKRCDRPYTVHKGQNRLQCHHCGATRSMPKECEACHSHEM
VTAGTGTEQVEEGLMKLFPDAKHVRIDSDTVRGKDKLHQTLDAINRQEHQILVGTQILSK
GHHFPHVTLVVVLDCDGALFSADFRAPEKLAQLVTQLAGRAGRASKPGEMWLQTHNPHHP
LLQDLVNNGYAHFARHALMERKASALPPYISQFVIRAEATESSSAYAFLQQARGVLLNSN
AANTSLSGLVPQMTGPFPCLIEKRQGRFRFMLVCSHEKRAPLHNALRLALPYLQGLPQAA
KVRWSVDIDPTDFS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggtattcattcaggtggctgtacctgtgccgcttcgccagctatttacctattctcat
accgacaccttacaatcaggcgtgcgggtgaaagtgtcattcggcccacgtcaattggtc
ggcattgtgattgaatccggtatagacatagatgacaccagtaaaataaaagccattaat
gaggttatagatagcgtgccggttattgatgaatcgctaagaaaaatggcgcattggtta
tggcagtattaccaccatgcgccgggggaagtgatacatgctatgcttcctgtgccttta
cgaaaaggcgagccagccacgccatcacccgcacaatacattcaagtgaccccagaaggt
cgaactaccgatagtgatagtctaagccgtgcgccaaaacaaatggcctgtttagaggct
gtcgtcgcttcgccgctaattgcaagtgaagcgcgcaaaaccttttcacccgcagtagtg
aaagcgttaatagataaagctcttattgagcgggtggacattacgcctgaactcacggcg
caagcctggttagataccttcgacattggcgaaaagccggtgcctgataaagagcaaggg
gtagcgattgcggcactaaaccagcagcatggtacctttgccataagcttgcttgaaggg
gtgacaggtagcggtaaaactgaagtgtatctgcaatcaatcgaacctttgcttaaagcc
ggtaaacaagtgcttattttagtgcctgaaattggtttaacgccgcagactgtttcacgg
ttcgaaaagcgttttaatattcctgtaggcgtattgcattctcaattgacggatgcagcg
cgattgtctgtttggcagcgagctagagcaggtgagttaggtattattattggtacgcgc
tcagctatttttacgccgcttaaaaaccctggcatgattatcgtagatgaagagcatgat
gagtcgttcaagcaacaagacgggcttaggtataatgcgcgagacttagcggccatgcgt
gctaaggagcacagcatccctttactactcggcagtgcgacacctgcgcttgagacatta
aacaacgcattgactggtcgctttgcgcatttacagctaactcgccgcgccgcaggggca
caaagtactaagcagtacttgctagatgcccgagaccagcctattcattacggtatttca
gaaggcttgctgacgattatgcgccagcatgtgaatgctggaaatcagattctggttttt
gtaaatagacggggctatgccccagctcttttatgtcatcactgtggcaccacggcgatg
tgtaagcggtgtgacagaccttataccgtgcataaagggcaaaacagactgcaatgccac
cactgtggtgcaacccgatctatgcccaaagagtgtgaagcttgccacagccatgaaatg
gtgacggcagggacgggcaccgagcaggtagaggaagggttaatgaagctcttccctgat
gccaaacacgtgcgtatagacagcgatacagtaagaggcaaagacaaactacatcaaacc
cttgatgcgattaaccgtcaagagcaccaaatactggtgggcacgcaaattttatcaaaa
gggcatcactttccccacgttacactcgtggtggttttagattgtgatggcgcgctattt
agtgctgattttcgggcgccagaaaagctagcgcagctagtcacacagcttgctgggcga
gcagggcgtgccagtaaaccaggagaaatgtggctgcaaacccacaaccctcaccatcct
ttgctacaagatttggtgaacaacggctacgcccattttgctcgccatgccttgatggag
cgaaaagcgtctgcattgcctccttatattagccaatttgtgatcagagctgaggcaaca
gagagctcatcggcctatgctttcctgcaacaggctagaggtgtgctgttaaactcaaat
gctgcaaacacaagtctgagcggcttagtaccgcaaatgacggggccgtttccttgcttg
attgaaaagcgccaggggcgttttcgctttatgctggtgtgcagccatgaaaaacgtgcg
ccgttacataacgctttacgcttagcactaccttatttacaagggctacctcaggcagca
aaggtacggtggtcggtagatatcgatcctaccgatttcagttag
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