Alteromonas stellipolaris LMG 21861: AVL57_20120
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Entry
AVL57_20120 CDS
T04545
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AVL57_20120 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asq03019
]
AVL57_20120 (groEL)
03110 Chaperones and folding catalysts [BR:
asq03110
]
AVL57_20120 (groEL)
03029 Mitochondrial biogenesis [BR:
asq03029
]
AVL57_20120 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
asq04147
]
AVL57_20120 (groEL)
Enzymes [BR:
asq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AVL57_20120 (groEL)
Messenger RNA biogenesis [BR:
asq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AVL57_20120 (groEL)
Chaperones and folding catalysts [BR:
asq03110
]
Heat shock proteins
HSP60 / Chaperonin
AVL57_20120 (groEL)
Mitochondrial biogenesis [BR:
asq03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AVL57_20120 (groEL)
Exosome [BR:
asq04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AVL57_20120 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AVL57_20120 (groEL)
Exosomal proteins of breast cancer cells
AVL57_20120 (groEL)
Exosomal proteins of colorectal cancer cells
AVL57_20120 (groEL)
Exosomal proteins of bladder cancer cells
AVL57_20120 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AMJ76064
UniProt:
A0AAW7Z3M3
LinkDB
All DBs
Position
complement(4467186..4468826)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVRFGNDARTKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIITEGHKSVAAGMNPMDLKRGI
DKAVIAAVEELKALSTDCADSKSIAQVGTISANSDSEVGDIIAQAMEKVGKEGVITVEEG
QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDSPFILLVDKKISNIRELLPTLEGV
AKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLDLEKVELEDLGTAKRVVINKDNTTIVDGNGDEEAIEGRCAQIKGQIEDSSSDY
DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV
RAAAKLASLTGENEDQTVGIKLALRAMEAPLRQIASNAGAEASVVVNEVKNGDGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIASLMITTEAMIADVPQDEAAPAMPDMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtacgttttggtaacgacgctcgtacaaaaatgcttaaaggcgta
aacacgctcgcaaacgcagtgaaagttacactaggtcctaaaggccgtaacgtagtacta
gataagtctttcggcgctcctaccatcactaaagatggtgtatctgtagctaaagaaatc
gaacttgaagacaagtttgagaacatgggcgcgcagatggttaaagaagtggcgtctaaa
gcgaacgatgaagcgggtgacggtacaactactgcaactgttttagcacaagctattatc
acagaaggtcacaagtctgtagcagcaggcatgaacccaatggatcttaagcgcggtatc
gacaaagctgttattgcagcggttgaagaacttaaagcgctttctactgattgtgctgac
agcaagtcaattgctcaggttggtactatctctgctaactctgattcagaagttggcgac
atcattgctcaagcaatggaaaaagtaggtaaagaaggcgtcattaccgttgaagaaggt
caagcacttcaaaacgaactagacgttgttgaaggtatgcagtttgaccgcggttaccta
tctccttacttcattaacaaccaagagaacggtactgttgaactagacagccctttcatc
ctattggttgataagaaaatttctaacatccgtgagttgcttcctacccttgaaggcgta
gcgaaagcaggtaagccactgatgattattgctgaagatgttgaaggcgaagccctagct
acattagtagtaaacaacatgcgcggtattgttaaagtagctgctgttaaagcaccaggc
tttggcgaccgtcgtaaagcaatgcttcaagacatcgctatcctaacgggtggtacggtt
atctctgaagaaattggtctagacctagaaaaagtagagctagaagaccttggtactgct
aagcgcgtagttatcaacaaagacaataccactattgttgatggtaacggcgacgaagaa
gcaattgaaggccgttgtgctcaaattaaaggtcagattgaagactcttcttcagactac
gacaaagaaaaacttcaagagcgtttagctaagctttctggtggtgttgcagtaattaaa
gttggtgcagctaccgaagtagaaatgaaagagaagaaagaccgtgttgaagatgcactt
catgcaactcgcgccgcggttgaagaaggcgtagtacctggtggtggtgttgcgctagtt
cgagcagcagctaagcttgctagcctaactggcgaaaacgaagaccaaacagtaggtatt
aagcttgcactacgtgcaatggaagcgcctctacgtcaaatcgctagcaacgccggtgca
gaagcatctgttgtggttaacgaagtgaaaaatggcgacggtaactacggttacaatgcg
ggtaacgacacgtatggcgacatgctagagatgggtattcttgacccaactaaagtaacg
cgctctgcactacagttcgcagcatcaatcgcttcacttatgatcacgactgaagccatg
attgcagatgtacctcaagatgaagcagcacctgcaatgcctgatatgggcggaatgggc
ggcatgggcggcatgatgtaa
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