Aeromonas schubertii: WL1483_1213
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Entry
WL1483_1213 CDS
T04186
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
asr
Aeromonas schubertii
Pathway
asr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WL1483_1213 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asr03400
]
WL1483_1213 (recB)
Enzymes [BR:
asr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WL1483_1213 (recB)
DNA repair and recombination proteins [BR:
asr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WL1483_1213 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALP40632
UniProt:
A0A0S2SFY1
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All DBs
Position
401698..405216
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AA seq
1172 aa
AA seq
DB search
MSRTLETLRFPLFGERLIEASAGTGKTYTIAGLYLRLLLGHGPADEEGRVTAHARPLSVT
EILVVTFTEAATAELRGRIRARIHEARLAFLRGQSGDPLLAQLLDEVPDHQQAARLLLAA
ERQMDEAAVFTIHGFCQRMLKSNAFESGALFETEFLTDDSQLKLQAVSDYWRADFYPAGE
SLARALRKHWKSPAELLAAINGWLDNPELEILPPVGDETLFDRHEREMARVAAVKAQWRE
HLDAIRAQTEGAVSRYTGKNYEGWLEKIGQWAHSDEHGYALPEPLARFARSTLLEHLKKG
GDAPGLPLFDAIEALVTRPPAIDDLVLQRAAREVHRRMGRAKREAYQLSFSDLLGDLDRA
LASPLGERLRDRIRATYRVAMIDEFQDTDPQQYRIFRSLYGGQEETALLMIGDPKQAIYG
FRGADIFTYIQARRAVSSHYTLGRNWRSSRPLVGAVNALFERARAPFIYDDDIPFLPVEA
QGKSKCLTLAGAEAPALCCWWLGQDPTINKGSYQSRMANATAAEIHRLLTLARQGEASIG
DAPLRAGDIAVLVRTGSEGRVMQQALSALGIASVYLSNRESVLESTEAREILLILHACLH
PSDERALRAALATSLFDLDAKALDAFSRDEKLWEATVQEFTDYRRQWRRVGVLAMLRALL
HRRQLAASLLAGPFGERRLTNYLHLAELLEQAAGELDGEYALLRWLAEATRDGGQAEEQV
LRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRESDTPLYHEESRTLLDLTRSAKALE
QAERERLAEDLRLLYVALTRGVYATWLGLAPVRSGAGKSSKTDLHKTAIGYLLQRGEEGE
AELMAEALAALAREVPGVVVGEPSLTRPAPLVDEHGEASAPRVRRFGGRIERDWWVSSYS
ALSTSGSHHDRGVLATPGFDAEVARERGEEAAPERSIFTFPRGARPGTLLHTLFEEIPFA
LARDPASHGEVAPRVAALLERDGFDPEWSDVLTAHLAAVLGTELLPGLRLGEVAHHQAEL
EFFLPMGRVTAEGLDAVRRVHDPLSARGKPLGFQSVQGMLKGFIDLVFEWQGRWFVLDYK
SNWLGNSPLDYAGAALEQAMLDHHYDLQYQLYTLALHRLLAHRLPDYDPARHLGGVFYLF
LRGMPEAGVFHAAPSLALVRALDSLFAGEEAA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaccctggaaaccctgcgctttcccctgtttggcgagcgcctgatcgaagcc
tccgccggcaccggcaagacctacaccatcgccggcctctacctgcgtctcttgctcggc
cacggcccggcggatgaggaggggcgggtcaccgcccacgcccggcctttgagcgtgacc
gaaattctggtggtgaccttcaccgaggccgccaccgccgagctgcgcggccgtattcgc
gcccgcatccacgaggcgcgcctggccttcctgcgcgggcaaagcggcgaccctttgctg
gcccagctgctcgacgaggtgccggatcaccagcaggcggcgcgcctgctgctcgccgcc
gagcggcagatggatgaggcggcggtcttcaccatccacggtttttgccagcggatgctc
aagagcaacgccttcgagtcgggcgccctgttcgagaccgagtttctcaccgacgacagc
cagctcaagttgcaggcggtgagcgattactggcgcgccgacttctacccggccggggag
tctctggcccgcgccctgcgtaaacactggaagagtccggcggagctgctcgccgccatc
aacggctggctcgacaaccccgagctcgagatcctgccccccgtgggggatgagaccctg
ttcgatcgccacgagcgggagatggcccgtgtggcggcggtgaaggcccagtggcgcgag
cacctcgatgccatccgcgcccagaccgagggggcggtgagccgctacaccggcaagaac
tacgagggctggctcgagaagattggccagtgggcccacagcgacgagcacggctacgcc
ctgcccgagcccctggcccgcttcgcccgctcgaccctgctcgagcacctcaagaagggg
ggggatgcccccggtctgccgctgtttgacgccatcgaggcgctggtgacccgccccccc
gccatcgacgatctggtgttgcagcgggccgcccgcgaggtgcacaggcgcatggggcgc
gccaagcgcgaggcctatcagctctcgttctctgacttgctgggggatctcgaccgggcg
cttgcctcgcctctgggagagcggctgcgcgatcgcatccgtgccacctaccgggtggcc
atgatcgacgaattccaggataccgacccccagcagtaccgcatcttccgctccctctac
ggcgggcaggaggagacagccctgctgatgatcggcgaccccaagcaggccatatacggc
tttcgcggcgccgacatcttcacctatatccaggcgcgccgggcagtgagcagtcactac
accctggggcgtaactggcgctcgagtcggcccctggtgggggcggtcaacgccctgttc
gagcgcgcccgtgcccccttcatctatgacgatgacatccccttcctgccggtagaggcc
cagggcaagagcaagtgcctgacgctggcgggggccgaggcgccggccctgtgctgctgg
tggctggggcaggaccccaccatcaacaaggggagctatcagtcgcgcatggcgaacgcc
acggcggcggagatccaccgtctgctgaccctggcgcgccagggggaggcctcgatcggc
gacgcgcccctgcgtgccggcgacatcgccgtgctggtgcgcaccggcagcgaggggcgg
gtgatgcagcaggccctctcggcgctcggcatcgcctctgtctatctctccaaccgcgag
agcgtgctcgagagcacggaggcgcgcgagatcctgctgatcctgcacgcctgcctgcac
ccgagcgacgagcgggccctgcgcgcggcgctcgccacctccctgtttgacctcgacgcc
aaggcgctggacgccttcagccgcgacgagaagctgtgggaagccacggtgcaggagttc
accgactaccgccgccagtggcgccgggtcggtgtgctggccatgctgcgcgccctgttg
caccggcgccagctggccgccagcctgctcgccggcccgtttggcgagcggcgcctgacc
aactatctgcacctggccgagctgctggagcaggcggcgggcgagctcgatggcgagtat
gccctgctgcgctggctggccgaggcgacccgggatggcggccaggccgaggagcaggtg
ctgcgcctcgagtccgagcgcaagctggtgcagatcgtcaccatccacaagtccaagggg
ctcgaatacccgctggtgttcctgccgtttatctgttcccaccgcgagagcgacaccccc
ctctatcacgaggagagccgcaccctgctcgatctcacccgctctgccaaggcgctggag
caggccgagcgcgagcggctggccgaagatcttcgcctgctctacgtggccttgacccgg
ggcgtctacgccacctggctggggctggcgccggtgcgctcgggggcgggcaagtccagc
aagaccgacctgcacaagaccgccatcggctacctgctgcaacggggcgaggagggggag
gccgagctcatggccgaggccctggccgccctggcgcgggaggtgccgggggtggtggtt
ggtgagccgtcactcacccgcccggccccgctggtcgacgagcatggggaagcgtctgcg
ccccgggtgcgccgcttcggcggtcgcatcgagcgcgactggtgggtcagctcctactcg
gcgctctcgacctccggtagccaccacgaccggggcgtgctggcgaccccggggttcgat
gccgaggtggcccgcgagcgcggcgaagaggcggcgcctgagcgctctatcttcaccttc
ccgcgcggcgcccggcccggcaccctgctgcacaccctgtttgaggagatccccttcgcg
ctggcgcgcgaccccgccagccacggcgaggtggcccccagggtggcggccctgctcgag
cgcgacgggttcgaccccgagtggagcgatgtactgactgcgcacctggccgccgtgctc
ggcaccgagctgttgcccgggctgcgcctgggggaggtggcgcaccatcaggccgagctc
gagttcttcctgcccatggggcgggtgacggccgaggggctcgatgcggtgcgaagggtc
cacgatcccctctcggcgcgcggcaagcctctcggttttcagagcgtgcagggcatgctc
aagggctttatcgatctggtgttcgagtggcaggggcgctggttcgtgctcgactacaag
tccaactggctgggcaatagccccctcgattacgccggcgcggccctcgagcaggccatg
ctcgatcaccactacgatctccagtaccagctctacaccctggcgctgcaccgcctgctg
gcccatcgtctgcccgattacgacccggcccgccacctgggcggcgtcttctatctcttc
ctgcgcggcatgcccgaggccggcgtcttccacgccgccccctcccttgcgctggtgcgc
gccctcgattcactctttgccggcgaggaggcagcatga
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