Aeromonas schubertii: WL1483_1318
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Entry
WL1483_1318 CDS
T04186
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
asr
Aeromonas schubertii
Brite
KEGG Orthology (KO) [BR:
asr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asr03400
]
WL1483_1318
DNA repair and recombination proteins [BR:
asr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WL1483_1318
Archaeal homologous recombinant proteins
WL1483_1318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
AAA_21
ABC_ATPase
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ALP40737
UniProt:
A0A0S2SG87
LinkDB
All DBs
Position
complement(3065969..3069727)
Genome browser
AA seq
1252 aa
AA seq
DB search
MKILSLSGENLASLTGAFTLDFTRGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVEKIGRAHEDERDKLTANDVKNILSRGHASGFAEVRFRGCDGRTWLARWAVRR
ARNRAEGRFQAQERSLTDVESGQVFSGSKRELQERIDELVGLSWEQFRRAVILPQGEFAA
FLKSDANERSALLERMTGTELYSAISIQTYERAREEQQKLAVINQRLGDVVLMDEESRRQ
WVSQQVSLTTALRHEQQQQQLMQELCDLHRRIADQLQGCSEGEVALEQALQAHGAAAAER
EGFARAEQAQVARADHDELARLTLEVQQQEKQIAELGPELARLEEQARQSALTEQQLLAE
KVAAEREWGALQPELKRAQELDTRILEKQQQLQKVRQEGAQEREVQLALEQEWRVQSQQV
AQLKEQHRQWSLWLEENRALAPVARQWQPLLTAMQDWAGDAGALQQLLTLRDHKLSALQQ
LQRQLEQGQQEREYWQREQARLQQQGSELEQQQWESRLARAQEQWQQQSEQLGQLRQLLE
LADYARSHAEQHARLQRELAELELSLGKLATLGEELAPALERLALQRDEARHALEQSRAI
ASFEQHRHMLGDGEPCPLCGAKEHPYRQSKPQVAGILGQLALRAQGLEREWEHLNHQYIQ
CQSERQELERQRLARQQHLPELEARAEQLILRWQQLGGEALQGHPLSLYQSPAEWQGVIH
RLLGHGQALEQGLAQSQQQLREARLGQQQLQAVRQQLGQLTEQHQQFDRHWQEADRQRIT
LEGELKGMGEQESTLRQRLEQGGLRLDEQMGGLPWRQWLGSQQWHEWQQSCEAWLHGQGE
WERLAGEIASLTPALSAQEARLQSQRERLHRLERDDKEHEQQCQGLLTSRAACLGGEAIA
LVERRWQARLQQIGRELEAIQGSARALGERQTELKTRLAHLEQEKQVSSRRKREVLGRWA
AHATTLGIAEYDLRRLLAITPDELKSRRAALQGLEDAVGEARTRLAERQRTLALELSKQD
RYREHHPELAALSQEALVQRLAMQEARCRELDEQLFACKSALAQAEAAALKAGSLQQEQA
TQQAVADHWQQLCDLIGQANGAKLRTFAQSLTLERLLLEANAQLGELSPRYRLERVPGTD
LALQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSKQTQVESLFIDEGFGTLDP
DSLDLALSCLDSLQASGRQIGVISHVQTLVERIGVQVRVEALGGGESRVLIP
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttgtcactgtcaggggaaaatctggccagcctgaccggcgcctttaccctc
gactttacccgcggggccctcggtgctgcgggcctgttcgccattaccggcaataccggc
gccggcaagagcaccttgctcgacgccatttgcctggccctctacgacgagatgccgcgc
tttatcgccaatcgcaagaatgtcgagaaaattggccgcgcccatgaagatgaaagagac
aagttaacggccaatgatgtcaaaaatatcctcagccgtggccatgccagcggctttgcc
gaggtgcgctttcgcggctgtgacggtcgcacctggctggcccgctgggcggtgcgccga
gcccgcaatcgtgccgaggggcgctttcaggcgcaagagcgctccctgaccgacgtcgag
tccggtcaggtcttctcgggcagcaagcgggagttgcaggagcgcatcgacgagctggtg
ggcctctcctgggagcagtttcgccgcgccgtcatattgccccagggggaatttgccgcc
ttcctcaagtccgatgccaacgagcgatccgccctgctcgagcggatgacaggcaccgag
ctctactccgccatctctatccagacctacgagcgggcgcgggaggagcagcagaaactg
gctgtaattaaccagcgcctcggtgatgtggtgctgatggatgaggagagccgcaggcag
tgggtgagccagcaggtgagcctcaccaccgccctcaggcacgagcagcagcaacagcag
ctgatgcaggagctctgcgatctccatcgccgcatcgccgaccagctgcagggttgcagc
gagggggaagtggcgctggagcaggccctgcaggctcacggggccgccgccgccgagcgt
gaggggttcgctcgtgccgaacaggcccaggtagcccgtgccgaccacgacgagttggcc
cgcctcaccctcgaggtgcagcagcaggagaagcagattgccgaactgggccccgagctt
gcccgactcgaagagcaggcccgccagagcgcgttgaccgaacagcaactgctggccgag
aaagtggccgccgagcgcgaatggggcgccctgcagcccgagctcaagcgggcgcaggag
ctcgatacccgtattctggaaaagcagcagcagttgcagaaggttcggcaggagggggcg
caggagcgggaggttcagctcgccctcgaacaggagtggcgcgtacagagccagcaggta
gcgcagctcaaggagcagcaccggcagtggagcctctggcttgaggagaacagggcgctg
gctccggtcgcccgccagtggcaacccttgctgaccgccatgcaggattgggccggggat
gccggcgccttgcagcaactgctcaccctgcgggatcacaagctgagcgccctgcagcag
ttgcaacgccagctggagcagggccagcaggagcgggagtattggcagcgcgagcaggcg
cggttacagcagcaggggagcgagctggagcagcagcagtgggagagtcgccttgccagg
gcgcaggagcagtggcaacagcagagcgaacagttgggccaactgcgtcagctgctggag
ttggccgactatgcccgcagccacgccgagcagcacgcccggttacagcgggagctggca
gagctggagctgtcccttggcaagctggccaccctgggggaggagctggcgccggccctt
gaacgcctcgccttgcaacgggatgaggcgcgtcacgccctggagcaatctcgcgccatc
gccagttttgagcaacatcgccatatgctcggcgatggggagccctgcccgctgtgcggc
gcgaaagagcacccctaccgccagagcaagccgcaggtggccggcattctgggtcagttg
gcactgcgggctcagggtctcgaacgggagtgggagcacctcaaccatcaatacattcag
tgtcagagcgagcgtcaggagctggagcgccagcgcctggctcgtcagcagcatctgccc
gagctggaggcgcgggccgagcagctgatcctgcgctggcagcagttggggggagaggcc
ctgcagggccatccgttgtcgctataccagagtcccgccgagtggcagggagtgatccat
cgtctgctcggccatgggcaagccctggagcaggggctggcccagagccagcagcaactg
cgggaagcccggctcggtcagcagcagcttcaggctgtgcgtcagcaactgggccagttg
acagagcagcaccagcagttcgaccggcactggcaggaggccgatcgccagcgcattacc
ctggaaggggagctcaaggggatgggggagcaggagagcaccctgcgtcagcgtctcgag
cagggggggctgcgcctcgacgagcagatggggggcctgccctggcgccagtggctcggc
agccagcagtggcatgaatggcagcaatcctgtgaggcctggctgcacggccagggcgag
tgggagcggctggccggcgagatagccagcctcaccccggccctgagtgcgcaggaggcg
cgtctgcagagtcagcgtgagcggttgcacaggctagagcgcgatgacaaggagcacgag
cagcagtgtcaggggctgctcaccagtcgcgccgcctgtctggggggggaggcgatagcc
ctggtggagcgtcgctggcaggcgcgtctgcaacagatcggccgcgagctggaggcgata
caaggcagtgcgcgcgccctcggcgaacgccagaccgagctcaagactcgcctcgcccat
ctggagcaggagaagcaggtgagcagtcggcgcaaacgcgaggtgttgggacgctgggcc
gctcacgccaccaccctcggcatcgccgaatacgatctgcgtcgtctgctggccatcacc
cccgatgagctcaagtcgcgccgcgccgccttgcaggggttggaggacgccgtgggcgag
gcccgtacccgtctcgccgagcggcaacggaccctggcgctggagctgagcaagcaagat
cgttatcgggagcatcacccggagctggcggccctgtcgcaggaggcgctggtgcagcgt
ctggcgatgcaggaggcccgttgccgcgagctcgacgagcagctgtttgcgtgcaagagc
gccctggcccaggccgaagcggccgccctcaaggcgggcagcctgcaacaggagcaggcc
acccagcaggcggtggccgatcactggcagcagctgtgcgatctcatcggacaggccaac
ggcgccaagttgcgcacctttgcccagagcctcaccctggagcggctgctgctcgaggcc
aacgctcagctgggcgagctgtcaccgcgctaccggctggagcgggtacccggtaccgat
ctggcgctgcaggtggtggatctcgacatgggggacgaggtgcgctcggtggactccctc
tccggtggtgagagcttcctggtctccctggcgttggcgctggccctctcgagcctgtcg
tcgaagcagacccaggtggagtcgctcttcatcgacgaggggttcggcaccctggatcct
gacagcctggatctggccctctcctgcctcgactccttgcaggcgagcggacggcagatc
ggggtcatctcccacgtgcagaccctggtcgagcgcatcggggtgcaggtgcgggtcgag
gccttggggggcggggagagccgggtgctgatcccgtga
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