Aeromonas schubertii: WL1483_2388
Help
Entry
WL1483_2388 CDS
T04186
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asr
Aeromonas schubertii
Pathway
asr03410
Base excision repair
asr03430
Mismatch repair
asr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WL1483_2388 (recJ)
03430 Mismatch repair
WL1483_2388 (recJ)
03440 Homologous recombination
WL1483_2388 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asr03400
]
WL1483_2388 (recJ)
DNA repair and recombination proteins [BR:
asr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WL1483_2388 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WL1483_2388 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WL1483_2388 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
bHLH_IRO3
Motif
Other DBs
NCBI-ProteinID:
ALP41807
UniProt:
A0A0S2SJE0
LinkDB
All DBs
Position
567822..569546
Genome browser
AA seq
574 aa
AA seq
DB search
MTLLIRRRPRVDDTHLPATLHPLLRQILASRGVDDPRLLERSATSLLSPHGLMGMAGAVD
LLVEVLHGQQRILIVGDFDCDGATSSALCVLALRAMGAPQVDFLVPNRFEYGYGLTPEIV
ELAVARGAELLITVDNGISSIAGVAAAKAAGMRVLVTDHHLPGHELPQADAIVNPNQHGC
DFDSKSLAGVGVAFYLMAALNTRLKQTGWFEARGLTAPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALIEVSRREGRRLTASDLGFALGPRLNAVGRLDDMSL
GVACLLCDDIHLARQLATEMDSLNQERKEIEQGMQQEALATLEQVRFRDGEVPCGIVLHR
NDWHQGVVGLVASKVKEKYHRPVIAFAESSETELKGSGRSIPGVHLRDALELLDTRHPGI
ISKFGGHAMAAGLSLPKDRIEAFRSAFEAVIAELVTPEILTGELLTDGALLDEELSLEMA
ELIRAAGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTAGSGLAIDAIAFGVDVRRWP
DASVRRVRLVYRLDINEWRGNRSLQLLVEHLEAL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcttgattcgccgccgtccccgggtagatgacactcatctgcccgctaccctc
catcccttgttgcgccagatccttgccagccggggagtcgatgatccccgcctgctggaa
cgcagtgccacctccctgctttctccccatggtctgatggggatggcgggggcggtcgat
ctgctggtggaggtgcttcatggccagcaacggatcctcatcgtcggggactttgactgc
gacggggcgaccagctcggctctctgcgtgttggccctgcgagccatgggggcaccgcag
gtggacttcctggtgccgaatcgcttcgaatacggttatggcttgacccccgagatcgtc
gagctggcggtggcacgcggcgccgagctgctgatcacggtcgataacggcatctcgagc
atcgccggggtggccgcggccaaggcggcgggaatgcgggtgctggtcaccgaccatcac
ctgccgggccatgagttgccccaggccgacgccatcgtcaatcccaaccagcacggctgt
gacttcgactccaagtccctagccggggtaggggtggccttctatctgatggcggcactc
aatacccgcctaaagcagacgggctggtttgaggcgcgtggactcacggcccccaatgtg
gccgattatctggacctggtggcgctcggcactgtggccgacgtggtggctctcgacggc
aacaatcgcatcctggtgcatcagggattgcagcgtattcgtgccggtcgctgccggccc
gggatccaggcgctgatcgaggtgtcgcgtcgggaggggcgccgcctcaccgcctccgac
ctcggcttcgccctcggtcctcgcctcaatgcggtcggtcgcctcgatgacatgtccctc
ggggtggcttgtctgttgtgcgatgacatccacctggcacgtcagttggcgaccgagatg
gactcgctcaatcaggagcgcaaggagatagagcaagggatgcagcaggaggctctggcc
acacttgagcaggtccgttttcgcgatggtgaggtgccctgcggcatagtgctgcatcgt
aacgactggcatcagggggtggttggtctggtcgcctccaaggtcaaggagaagtatcac
cgcccggtgatcgccttcgccgagagcagcgaaacagagctcaagggatccggccgctct
atcccgggggtgcacctgcgcgatgcactcgaactgctcgacacccgccaccccggcatc
atcagcaagttcggtggccacgccatggccgccggcttgtcattgcccaaggatcgcatc
gaggcgtttcgcagtgccttcgaggcggtcatcgccgagctggtgaccccggagatcctg
accggggaactgctcaccgacggggctctgctggatgaggagctgagtctggagatggcc
gagctgatccgcgccgccggcccctggggtcaggccttcccggaacccctgttcgatgga
gagttcgtgctggtgcagcaacgtctggtgggggagaaacacctcaagatgatgctcacc
gcagggagcggactcgccatcgatgccatcgccttcggggtggatgtgcgccgctggccc
gatgcctcggtgcgccgggtgcgccttgtctatcgcctcgatatcaatgagtggcgcggc
aaccgcagcctgcaactgctggtggagcacctcgaggcgctatga
DBGET
integrated database retrieval system
