Aeromonas schubertii: WL1483_2417
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Entry
WL1483_2417 CDS
T04186
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
asr
Aeromonas schubertii
Brite
KEGG Orthology (KO) [BR:
asr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asr03016
]
WL1483_2417 (rnb)
Enzymes [BR:
asr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
WL1483_2417 (rnb)
Transfer RNA biogenesis [BR:
asr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
WL1483_2417 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ALP41836
UniProt:
A0A0S2SJI6
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All DBs
Position
4174184..4176175
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AA seq
663 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVLHGDRV
VALIRTENEKEVAEPDELLEASLTRFVARVKMFRDRLNVVPDHPNMKEAMKARPKKGLDE
KDFKEGDWVVATLKRHALNDNGFFAEITRKIADKEDHNVPWWVVLARHNLAQIEPADLPE
WQDLEADLPRQDLTDVAFFTIDGPKTKDMDDALAIRETEQGWELLVAIADPTAFVAEGSE
LDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLTIHKDGLLDEQTEF
FAARIRSRARLNYDDVSDLFEHDKPLDVDATVLAQLPLMKAMTEARINWRTEHALVFPDR
PDYDFELGENGAVLAIHMSPRRLANRMVEESMIAANICAGRVLGKTVGYGIFNVHSGFDE
DSLDGAIELLKSAEAPFEKEEIASLSGFCALRRWIDGLDTRWLDGKIRRFQSYALMSAEP
GAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGQQPGARPSEELTQHLTDCRRLHRM
VERDIAGWLYARFLAPLVATDTVFEGEIIDVMRAGLKVRLRENGAVAFVPAKLILDNKDR
LECNWDSGRVFLDKEPIMELGQTLAVKLAEVVEETRSVVAKPAVAIVPGPLPEAPAADSP
AAE
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgagaatatcccc
aagaaagagggcgtgatccgcgcctctgaccggggtttcggtttcctcgaggtcgatgag
aagaccagctacttcgtgccccctccctacatgaagaaggtgctgcacggtgaccgcgtg
gtcgccctgatccgcaccgagaacgagaaggaggtggccgagccggatgaactgctggag
gcctccctgacccgcttcgtggcccgcgtgaagatgttccgcgatcgcctcaacgtggtg
ccggatcaccccaacatgaaggaggcgatgaaggcccgcccgaagaaggggctggacgag
aaggatttcaaggaaggggactgggtggtggcgaccctcaagcgccacgccctcaatgac
aacggcttcttcgccgagatcacccgcaagatcgccgacaaggaagaccacaacgtgccc
tggtgggtggtgctggcgcgccacaacctggcccagatcgagccggccgacctgcccgaa
tggcaagatctggaggcggatctgccgcgccaggatctcaccgacgtcgccttcttcacc
atcgacggccccaagaccaaggacatggatgacgccctcgccatccgtgagaccgagcaa
ggctgggagctgctggtcgccatcgccgacccgaccgccttcgtggccgaagggagcgag
ctggacaaggaggccgcccagcgtgccttcaccgtctacatgccggggcgcaacgtgccc
atgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaagagcgcaac
accctgtgcgcccgcctgaccatccacaaggatggcctgctggacgagcagaccgagttc
ttcgccgcccgcatccgctcgcgcgcccgtctcaactatgacgacgtctcggatctcttc
gagcacgacaagccgctggacgtggacgccaccgtgctggcccagctgccgctgatgaaa
gccatgacagaggcgcgcatcaactggcgcaccgagcacgccctggtgttcccggaccgt
cccgactacgacttcgagctgggtgagaacggcgccgtgctggccatccatatgtcgccg
cgccgcctcgccaaccgcatggtggaagagtcgatgatcgccgccaacatctgcgccggc
cgcgtgctgggcaagaccgtcggctacggcatctttaacgtccacagcggctttgacgag
gactccctcgacggcgccatcgagctgctcaagagcgccgaggccccgttcgagaaggaa
gagatcgccagtctgtcgggcttctgcgccctgcgccgctggatcgacggcctcgacacc
cgctggctggacggcaagatccgccgcttccagagctatgccctgatgtcggccgagccg
ggagcccactacggcctgggtctggatgcctacgccacctggacctcgccgatccgtaaa
tacggtgacatggtcaaccatcgcctgctcaaagccgtcatcgccggccagcaaccgggc
gcacgcccgagcgaggagctgacccagcacctgaccgactgccgccgcctgcaccgcatg
gtggagcgcgacatcgccggctggctctatgcccgcttcctggcccccctggtcgccacc
gacactgtgttcgagggcgagatcatcgacgtgatgcgtgccggcctcaaggtgcgcctg
cgcgaaaacggcgccgtcgccttcgtgccggccaagctgatcctcgacaacaaggatcgc
ctggagtgcaactgggacagcggccgtgtcttcctcgacaaggagccgatcatggagctg
ggccagaccctcgccgtgaagctggccgaggtggtggaagagacccgctccgtggtcgcc
aagcccgccgtggccatagtaccgggcccgttgcccgaggcgccggccgctgacagcccg
gctgccgagtaa
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