Aeromonas schubertii: WL1483_596
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Entry
WL1483_596 CDS
T04186
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
asr
Aeromonas schubertii
Brite
KEGG Orthology (KO) [BR:
asr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asr03019
]
WL1483_596
Messenger RNA biogenesis [BR:
asr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
WL1483_596
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
ARM_ECM29
Motif
Other DBs
NCBI-ProteinID:
ALP40015
UniProt:
A0A0S2SEE4
LinkDB
All DBs
Position
complement(3654886..3656808)
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AA seq
640 aa
AA seq
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MKLTTQLVSFITLCVITAMAMVMLGGVFSFRQLGFELQEKKVDALVEVLDRNFDSQTESA
AMVEWLPSLLRSAHVISLDVYRGEQKVYGFQNLTQAEPDDPLVDYRLTLPRHAEFEARLR
LERPFKEFEYSLEAMFGISFGVFIVVFGLWFSIRWLREQLRGAELLNHRAELILSGSLGK
LNHDPAEEWPASASKAIDYLLAELADARKERSRFDSFIRSNAFVDKVTCTGNRIFFDNRL
ESAIRDSAALNGGMLLIELAGLDELEGNESAMNEVLQEASLSIGTFVRKHAGALQARYAA
HLFAVLLPNQGESELVDAATQLHKSLLRLHWPEAVEGEIYVGAVCYRTSDTMAQVQGEAE
LALKSARLQGGSGWFLFEKLSPDEENTNKGTVRWRTLLTRRIEERAVRLYSQPVMQGQGQ
LVLQQELLARLDDEQGHELLAGVFMPMAEKSGMLLPFDRLMAEQVLSLLQRLPPDAPPVS
LNICAQSLLNREFHRWLFFSLFQLPRSRNEQLILECSESQITRYFEALKKPLRSLRMLGV
RLTVDHAGQDVVSTQYIKEFDINFLKIHPSLVRDIHLRQVNQMAVRSLIGGCANTHTRVL
AVGVESAEEWHCLRHLGVHAGQGIWFAGPAPMVIPDAPAP
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaccactcaactcgtctcattcatcactctctgtgtcatcacggccatggcc
atggtgatgctcggtggcgtcttcagtttccgccagctgggctttgagctgcaggagaag
aaggtcgatgccctggtcgaggtgctggatcgcaacttcgacagccagaccgagtcggcc
gccatggtggagtggttgccaagcctgctgcgctccgcccatgtcatctccctcgatgtc
tatcgtggtgagcagaaggtctacggctttcagaacctgacccaggccgagccggacgat
ccgctggtggattaccgcctcaccttgccaaggcacgccgagtttgaggcccgcctcagg
ctggagcgccccttcaaggagttcgaatactcccttgaggcgatgttcggcatctcgttc
ggggtctttatcgtggtctttggcctctggttctccatccgttggctgcgcgagcagctg
cgcggcgccgagttgcttaaccacagggctgaactgattctctccggctcccttggcaag
ctcaaccatgatccggccgaggagtggcccgccagtgccagcaaggcgatcgattacctg
ctggccgagctggccgatgcccgcaaggagcgcagccgcttcgacagcttcatccgcagc
aatgccttcgtggacaaggtgacctgcaccggcaaccgcatcttcttcgacaaccggctg
gagagtgccatccgtgactcggcggccctcaatggcggtatgctgctgatcgaactcgcc
ggtctcgacgagctggaggggaacgagagcgccatgaacgaggtgctgcaggaggcgagc
ctctctatcggcaccttcgtgcgcaaacacgccggtgccctgcaggcgcgctatgcggcg
cacctcttcgccgtactcttgcccaatcagggagagagtgagctggtggatgcggccacc
cagctgcacaagagcctgctgcgcctgcactggcccgaggcggtggagggagagatctat
gtgggcgccgtctgttatcgcacctcagacaccatggcccaggtgcagggggaggccgag
ctggccctcaagagcgctcgtctgcaggggggaagcggctggttcctgttcgagaagctc
tcgcccgacgaggagaataccaacaaagggacggtgcgctggcgcaccctgctgacccgc
cgtatcgaggagcgggccgtgcgtctctacagccagccggtgatgcaggggcaggggcag
ctggtgttgcaacaggagctgctggcccgtctcgacgacgagcaggggcatgaactgctg
gcgggtgtcttcatgcccatggccgagaagtcgggcatgctgcttccgttcgatcgcctg
atggccgagcaggtgttgtcgctgctgcagcgtctgccccccgacgccccgcccgtcagc
ctcaacatctgtgcccagagcctgctcaaccgggagttccaccgctggctcttcttctcg
ctgttccagctgccgcgcagtcgcaacgagcagctgattctggagtgttcagagtcccag
atcacccgctacttcgaggccctcaagaagcccctgcgctccctgcgcatgctgggggtg
cgtctgaccgtggatcatgcggggcaggatgtggtgagcacccagtacatcaaggagttc
gacatcaacttcctcaagatccaccccagcctggtgcgggacatccacctgcgtcaggtc
aaccagatggcggtgcgcagtctgatcgggggctgtgccaatacccatacgcgggtcctg
gcggtcggggtagagagcgccgaggagtggcactgcctgcgccacctcggggtgcacgcc
gggcaggggatctggtttgccgggcccgctcctatggtgatcccagacgcccctgctccc
tga
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