Actinobacillus suis ATCC 33415: ASU1_01280
Help
Entry
ASU1_01280 CDS
T03246
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ass
Actinobacillus suis ATCC 33415
Pathway
ass03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASU1_01280 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ass03021
]
ASU1_01280 (rho)
03019 Messenger RNA biogenesis [BR:
ass03019
]
ASU1_01280 (rho)
Transcription machinery [BR:
ass03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ASU1_01280 (rho)
Messenger RNA biogenesis [BR:
ass03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ASU1_01280 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
NACHT
AAA_22
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
AIJ30533
LinkDB
All DBs
Position
complement(276051..277313)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLTQLKNTPVSELVEMGENQMGLENLARLRKQDIIFAILKQHAKSGEDIFGQGVLEILP
DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLQTGDKIEGKIRPPKEGERYFALLKVDLV
NDDKPEVSRSKILFENLTPLHANSRLKMERGNGSTEDLTARILDLASPIGKGQRGLIVAP
PKAGKTVLLQNIAQSITHNYPECELIVLLIDERPEEVTEMQRTVRGEVIASTFDEPATRH
VQVAEMVIEKAKRSVEHKKDVVILLDSITRLARAYNTVTPVSGKILSGGVDANALHRPKR
FFGAARNVEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMELHLSRKIAERRVFPAIE
FNRSGTRKDDLLMSPEEHRNAWMLRKVLNPMDEVAAMEWLIDKLSVAKTNEEFFEVMKRS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttactcaattaaaaaatacaccggtttcggaacttgtcgaaatgggtgaaaat
caaatgggcttagaaaacttagctcgtttacgtaaacaagacattatttttgcaatcctc
aaacaacacgctaaaagcggtgaagatatctttggccaaggcgtattagaaattcttcct
gacggtttcggtttcttacgttcggcagacagttcatacctcgctggtcctgatgatatc
tatgtttcaccaagccaaatccgccgttttaatcttcaaaccggtgataaaatcgaaggt
aaaattcgcccgccgaaagaaggtgaacgctactttgcattattaaaagttgatcttgtt
aatgatgacaaacctgaagtttctcgcagcaaaatcttatttgaaaacttaacgccatta
cacgcaaattcacgtttaaaaatggagcgtggaaacggttcaaccgaagatttaaccgca
cgtattcttgatttagcatctccaatcggtaaaggtcaacgtggtttgatcgtagctcca
ccaaaagctggtaaaaccgttctactacaaaatattgcgcaaagtattacgcataattac
ccagaatgtgaattgatcgtacttctgattgacgaacgtccggaagaggttaccgaaatg
caacgtaccgtacgcggcgaagtaattgcctcaacttttgatgagccggcaacacgtcac
gtacaggtggcagaaatggtaattgaaaaagcaaaacgctcggtagaacacaagaaagac
gtggttattctattagactcaatcactcgtcttgctcgtgcttacaatactgtgacccct
gtttcaggtaaaatcctttccggtggtgtggatgcaaacgcattacacagaccaaaacgt
ttcttcggtgcagctcgtaacgtagaagaaggcggtagcttaaccattatcgcaaccgca
ttggttgatacaggttcgaaaatggatgaagttattttcgaagaatttaaaggtaccggt
aatatggaattacacctttctcgtaaaattgcggaacgccgtgtattcccggctattgag
tttaaccgttctggtacacgtaaagatgacttattaatgtcgccagaagaacaccgcaat
gcgtggatgttacgtaaggtactgaatccaatggatgaagtggctgcaatggaatggtta
attgataaacttagcgttgcaaaaactaacgaagaattcttcgaagtaatgaaacgttca
taa
DBGET
integrated database retrieval system
