Actinobacillus suis ATCC 33415: ASU1_03020
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Entry
ASU1_03020 CDS
T03246
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ass
Actinobacillus suis ATCC 33415
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ass03016
]
ASU1_03020
Enzymes [BR:
ass01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ASU1_03020
Transfer RNA biogenesis [BR:
ass03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ASU1_03020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Hemolysin_N
Motif
Other DBs
NCBI-ProteinID:
AIJ30876
LinkDB
All DBs
Position
complement(657660..659636)
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AA seq
658 aa
AA seq
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MFQDNPLLAQLKQQIEANKEYVEGMVKASDKAFGFLECDKKSYFIPPMEMKKVMHGDKVK
AVVKREGDKEQVEIDSLLEPMLDRFIAQVRFNKDNKLQLIVDHPSIKNIIPANTHKKVTE
TLESGDWVLAQLKTHPLRDDRFLFAQVTQFICKADDNFAPWWVTLARHEQPREPVANEKS
YELHDELDREDLTSLYFTTIDSPSTQDMDDALYIEPIEQGEEQTGWRLVVAIADPTAYIP
ENSNIEKAARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGYIETDLAGNIIG
DTRFVSAWVESKAKLAYDNVSDYLEQVENAWQPESAETKQQIDWLHQFTLARIEWRRSNA
LLFKESGDYSFELNEDGSVRDIHVEYRRIANQMIEESMIIANICCAKFLADNAKTGVFNT
HAGFEPKNLELAQKFLLDTLANDENRDALTALYAPEKLATLEGYCEMRRSIDEFPEKFLE
LRLRRYLTFAEFKSEVAPHLGLGISHYATWTSPIRKYGDMVNHRLIKQVLLGKQAKTVEE
SILVRLQEARRQNRLVERDIADWLYARYLFPMVEQAVEFDCEIADVSRGGVRAKVIANGA
QIFVPFSTIHDKKEEMEFRPEEIALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagacaatccgttacttgcccaattaaaacaacaaattgaggcaaataaagaa
tatgtggaaggcatggttaaagcctcggataaggcattcggttttttagaatgtgacaag
aaaagttatttcattccgccaatggaaatgaaaaaagtaatgcacggcgataaagtgaaa
gccgtagtaaaacgtgaaggcgacaaagaacaggtagaaatcgacagtttacttgaaccg
atgcttgatcgctttattgcacaagtgcgttttaacaaagataataaattacaacttatt
gtcgatcacccaagcattaaaaatatcattccggcaaatacgcataaaaaagtcacagaa
acattggaaagcggtgactgggtgctagcacaactcaaaacccatccgttacgtgatgat
cgtttcttatttgctcaagtcactcaatttatctgtaaagcggacgataatttcgccccg
tggtgggtaacattagctcgtcacgaacagccccgtgaaccggtagcgaatgaaaaaagc
tatgagttacacgatgaattagatcgtgaagatctcacatcactctatttcactacgatc
gacagtcctagcacgcaagatatggacgatgcgctatatatcgagccaatcgaacaaggt
gaagaacaaaccggttggcgtttagtggtggcgattgctgatccgaccgcctatattccg
gaaaattcaaatatcgaaaaagctgctcgtcaacgttgttttactaactatttaccgggc
ttcaatattccgatgttacctcgtgagctgtcagatgatctctgttctctcgtaccaaat
gagaaacgtccggcgttagttggttatatcgaaaccgatttagccggtaatattattggc
gatacacgttttgtttcggcatgggtggaaagcaaagcgaaattagcttacgacaacgta
tcggattatctcgaacaagttgaaaatgcgtggcagccagaaagtgcggaaaccaaacaa
caaattgattggttacaccaatttactcttgcacgcatcgaatggcgccgtagcaatgcg
ttgttatttaaagagtccggcgattactcatttgaattaaatgaagacggttcggtacgt
gatatccatgtggaataccgccgcattgcaaatcaaatgatcgaagagtcgatgatcatt
gccaatatttgctgtgcgaaattcttagccgacaatgccaaaactggcgtatttaatacc
cacgccggctttgagccgaaaaatttagaattagcacaaaaattcttattggatacgtta
gctaatgacgaaaaccgcgatgcgcttacggcattatatgcgccggaaaaactagcaaca
cttgaaggctattgcgaaatgcgtcgttcgattgacgagtttccggagaaattcttagag
cttcgtttacgccgttatctcacttttgcagagtttaaatcggaagttgcaccgcatctc
gggttagggatcagccattatgcgacttggacatctccaatccgtaagtacggcgatatg
gtcaaccatcgcttaatcaagcaagtattacttggcaagcaggcgaaaacggtagaagaa
agcatcttagttcgtttacaagaagctcgccgtcaaaaccgtttggtggaacgtgatatc
gctgattggctctatgcacgttaccttttcccaatggtggaacaagcggtcgaatttgat
tgtgaaattgcagatgtttctcgtggcggtgtacgagcgaaagtgatcgcaaacggcgca
caaattttcgtaccgttctcaaccattcacgataaaaaagaagaaatggaattccgtccg
gaagaaatcgcactttacattaaaggcgaaaaagcttaccaaatcggacaggcggttaaa
gtcaaactcaccgaagtacgtttagaaacacgttcaattgtggggaatatcatctaa
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