Actinobacillus suis ATCC 33415: ASU1_03310
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Entry
ASU1_03310 CDS
T03246
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ass
Actinobacillus suis ATCC 33415
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ass03032
]
ASU1_03310
03400 DNA repair and recombination proteins [BR:
ass03400
]
ASU1_03310
Enzymes [BR:
ass01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ASU1_03310
DNA replication proteins [BR:
ass03032
]
Prokaryotic type
DNA Topoisomerases
ASU1_03310
DNA repair and recombination proteins [BR:
ass03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ASU1_03310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
DUF4795
Zn_ribbon_LysW
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AIJ30934
LinkDB
All DBs
Position
717114..719723
Genome browser
AA seq
869 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPKSGSESEKNEKAKPISTKGMTA
EQKAKLKAEKDRAALVKRMGIDPYHDWKANYQVLPDKEKVVSELKSLAKKADHIYLATDL
DREGEAIAWHLREVIGGDDDRFSRVVFNEITKNAIQKAFEKPDHLNLDRVNAQQTRRFLD
RVVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFQPEEYWEILANTLTAKGK
LPLDLTGYKGKKFSAKNQKQADEAVKALRGSEFVVSEIDKKPTSSKASPPFITSTLQQTA
STRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALAMARGYIEEQFGSEYLPAKPN
FYSSKEGAQEAHEAIRPSDVNVKMSDLKGMEKDAERLYELIWRRFLACQMTPARYDSTSL
TVTAGDYELKAKGRVLRFDGWTKALPVQGKTAEDQVLPEVALNEKLMLEDVLPSQHFTKP
PARFSEAALVKELEKRGIGRPSTYAAIISTIQERGYVRIENRRFYAEKMGEIVTDRLDES
FSDLMNYDFTANMEETLDQIAEGNKNWKEALNNFFKDFSEQLTKAELDELEGGMKPNSLV
PTEIDCPTCARKMAIRTASTGVFLGCTGYALPPKERCKTTMNLIPEAELLNVLDEESEAK
ALLARKRCPKCDSAMDSYVIDPQRKLHICGNNPNCDGYVLEQGTFKIKGYDGPIVECDKC
GADMHLKLGRFGKYMGCTACDNTRKILKNGEVAPPREEPTHFPELKCEKSDAYFVLRDGA
SGVFMSAHNFPKSRETRAPKVAELAQYRDRLPEKLQYLVDAPQQDPEGNEAIIRFSRKEK
RQYVTSEKDGKATKWIVDYVDGKWLERKK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcattggttattgtggagtcaccggcgaaagctaagacaatcaataaatat
ttaggtagcgattatgtggttaaatcgagtgtcggtcatattcgtgatttacctaaaagc
ggtagtgaaagtgaaaaaaatgagaaagccaaaccgatttccaccaaaggcatgactgct
gaacaaaaagcaaaattaaaagcagaaaaagatcgtgccgcattagtcaaacgtatgggc
atcgatccttaccatgattggaaagcgaattaccaagtgcttccagataaagaaaaagtt
gtttccgaattaaaatccttagctaaaaaagcagatcatatttatctcgcaaccgacttg
gatagagaaggggaagcaattgcttggcatttacgagaagttatcggtggtgatgacgat
cgttttagccgagtggtgttcaatgaaattaccaaaaatgctattcaaaaagcatttgaa
aagccggatcatttaaatttagaccgtgtaaatgcccaacaaacacgccgctttttagac
cgtgtggtcggctttatggtatcgcctttgctttggaaaaaagtcgcacgaggcttatct
gcagggcgtgtacagtcagttgcggttaaacttttagttgagcgtgagcgagaaattaaa
gcgttccaaccggaagaatattgggaaattttagccaatacattaacggctaaaggaaaa
ttaccacttgatttaactggctataaaggtaaaaaattctcggcgaaaaatcaaaaacaa
gcggatgaagcggtaaaagcgttacgaggtagcgaatttgttgtttcagagattgataaa
aaaccaacttcatcaaaagcgagcccaccatttattacttcaacattgcaacaaacggca
agcacccgtttgggctttggcgtgaagaaaaccatgatgttagcgcaacgtttatatgaa
gcgggttatattacctatatgcgtaccgactcaaccaatttaagtcaagacgcattagcg
atggcgcgtggttatattgaagaacaattcggcagtgagtatttaccggctaaaccgaat
ttctattcaagtaaagaaggtgcacaagaagcgcacgaagcgattcgtccgtcagacgtg
aatgtaaaaatgtctgatttaaaaggtatggaaaaagatgccgagcgtctttatgagctt
atttggcgtcgtttcttagcttgccagatgacaccggctcgttatgattcaaccagcctt
actgttacggcaggtgactatgaattaaaagcgaaaggacgtgtattgcgttttgacggt
tggacgaaagcattaccagtacaaggcaaaaccgctgaagatcaagtgttaccggaggtc
gcactcaatgaaaaattaatgttagaagatgtgctacctagccagcactttactaaaccg
ccggcacgtttctctgaagccgctttggttaaagaattggaaaaacgtggtatcggtcgc
ccgtctacttacgcagcaattatttcaaccattcaagagcgtggctatgtgcgtattgaa
aatcgccgtttctatgcggaaaaaatgggtgaaattgttaccgaccgtttagacgaatcc
tttagcgatctaatgaattacgactttaccgccaatatggaagaaacactcgaccaaatt
gcggaaggtaataaaaactggaaagaagcgcttaataatttcttcaaagatttctctgag
cagctgactaaagccgaattagatgagctggaaggtgggatgaagccgaatagtcttgtg
ccaacggaaattgattgtccgacttgtgcaagaaaaatggcaattcgtaccgcttctacc
ggtgtattcttaggctgtaccggttatgcgttaccgccgaaagagcgttgcaaaaccaca
atgaatctgattccggaagcggaattactcaatgtgttagatgaagaatcggaagcaaaa
gctttattagcacgtaagcgttgtccgaaatgtgattcggcaatggatagctatgtaatc
gatccgcaacgtaaattacatatttgtggtaataatccgaattgtgacggctatgtgtta
gaacaaggtacattcaaaattaaaggctatgatggcccgattgttgagtgtgataaatgc
ggtgcggatatgcatctcaaacttggtcgtttcggtaaatatatgggttgtaccgcttgc
gataacactcgtaagattctgaaaaatggtgaagtggctccgcctcgtgaagagccgacc
catttcccggaactcaaatgtgagaaatcggatgcgtatttcgtattacgtgacggcgca
agcggtgtgtttatgtcggcacacaatttcccgaaatcacgagaaacacgggcgccgaaa
gttgccgaattagcacaataccgtgatcgtttaccggaaaaattacaatatcttgtcgat
gcacctcagcaagatccggaagggaatgaagcgattatccgctttagccgtaaagaaaaa
cgtcaatatgtgacctctgaaaaagacggtaaagcgactaaatggatcgtagattacgtg
gacggcaaatggctagaacgtaaaaaataa
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