Actinobacillus suis ATCC 33415: ASU1_03580
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Entry
ASU1_03580 CDS
T03246
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ass
Actinobacillus suis ATCC 33415
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ass03016
]
ASU1_03580 (truB)
Enzymes [BR:
ass01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ASU1_03580 (truB)
Transfer RNA biogenesis [BR:
ass03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ASU1_03580 (truB)
Prokaryotic type
ASU1_03580 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIJ30986
LinkDB
All DBs
Position
complement(781615..782532)
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AA seq
305 aa
AA seq
DB search
MSRPRKKGRDVHGVFLLDKPQGMSSNDILQKVKRLFQANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYQVTAKLGERTDTSDAEGQVVETRAVNVSETEIISALDQFRGDIL
QVPTMFSALKHNGKPLYEYARQGITVEREARPITIFELRFIEYSAPYLTLEVHCSKGTYI
RTLVDDLGEVLGCGAHVTVLRRLAVANYPIEAMMSYADLQNLSENQPLEALDQYLLPLDT
AVESLPKINLTAEQTKAVGFGQRVKFENIDQTYGQVRLFSEHGQFLGVAEITNDNVIRPS
RMVNL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtctagacctcgtaaaaaagggcgtgatgttcacggcgtatttttattagataaaccg
caaggaatgtcgtcaaatgatattctgcaaaaggtcaaacgcttatttcaagcaaataaa
gcggggcataccggtgcattagatccgcttgcgaccggaatgttaccaatttgtttgggg
gaagcgactaaattttcgcaatttttgcttgattcggacaaacgttatcaagttactgca
aaattaggtgaacgtaccgatacgtcggacgcagaagggcaagttgttgaaacccgtgct
gtgaacgtaagtgaaacggaaattatttcagcgttagatcaatttcgtggtgatatttta
caagttccaactatgttttccgcattgaaacataacggcaaaccactttatgaatatgct
cgtcaaggcattacggtggaacgagaagcgcgcccgattacgatttttgagttacgcttt
atcgaatattccgcgccttatcttacgttagaagtacattgctcaaaaggtacttatatc
cgtactttggtggatgatttaggtgaagtattaggttgtggcgcacatgttacggtttta
cgccgtttggcggttgcaaattatccgattgaagcgatgatgagctatgcagatttgcaa
aatttaagtgaaaatcaaccgcttgaagcattggatcaatatcttttacctttagatacc
gccgtagaaagtctgcctaaaataaatctaacagcagagcaaaccaaagcggtcggtttc
ggtcaaagagtcaaatttgaaaatatcgatcaaacttacggtcaagttcgtttattttca
gaacatggtcaattcctcggagtagcggaaatcaccaatgataatgtgattcgcccgagt
cgaatggtaaacctttag
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