Actinobacillus suis ATCC 33415: ASU1_04245
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Entry
ASU1_04245 CDS
T03246
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ass
Actinobacillus suis ATCC 33415
Pathway
ass03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASU1_04245 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ass03400
]
ASU1_04245 (uvrA)
DNA repair and recombination proteins [BR:
ass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASU1_04245 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASU1_04245 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_22
nSTAND3
AAA_21
AAA_25
DnaJ_CXXCXGXG
AAA_23
Viral_helicase1
cobW
NACHT
BCA_ABC_TP_C
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AIJ31119
LinkDB
All DBs
Position
complement(941497..944325)
Genome browser
AA seq
942 aa
AA seq
DB search
MQYIDVRGARTHNLKNINLILPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRC
PDHDLPLAAQTISQMVDRVMEEPEGKRLMLLAPVVKDRKGEHVKLLENLTASGYIRARID
GEICDLSDPPALELQKKHTIEVVVDRFKVRSDITTRLAESFETALDLSGSTAIIADMDDP
SADEIVFSSSFACPHCGYSLHELEPRLFSFNNPAGACPTCDGLGVEQYFDPNKVVQNPDV
SLASGAIKGWDRRSFYYFGLLKSVADHYDFSLDTPFKELTKKQREIILNGSKDEIEFVYV
NDRGDKVKRKHTFEGVLNNMARRYKETESNSVREELAKYINNRPCVECEGSRLRREARYV
FLDKTNLPMVSEKSIGEALEFFEQLDLAGQKAKIAEKILKEIRERLQFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTV
IVVEHDEDAIRAADHIVDIGPGAGVHGGQVIAQGTAEEIMQVEDSITGQFLSGKQKIEIP
AKRVPYDAAKLLTLKGASGNNLKQVQLDIPVGLFTCITGVSGSGKSTLINDTLFPLAQNA
LNRAERTDVAPYESIDGLSHFDKVIDIDQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYNVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYK
GKTIHQVLDMTVEEAREFFAPVPAIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLA
TELSKRDTGKTLYILDEPTTGLHFADIKQLLSVLHKLRDQGNTIVVIEHNLDVIKTADWI
VDLGPEGGSGGGQIIATGTPEEVAKDKRSHTARFLKEILAKG
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacattgatgttcgtggtgcgagaacccacaaccttaaaaatatcaacttaatt
ctccctcgagataaatttattgtaattaccggcttatccggatcgggtaagtcttcttta
gcttttgatacgctgtatgcggaagggcaacgccgttatgtcgaatccctttctgcttat
gcacgccaattcctttcattgatggaaaaaccagatgttgaccatattgaagggctttca
ccggcaatttctattgagcaaaaatccacttcgcataaccctcgttccacggtggggacg
gtaactgaaatccacgactatttacgtctattatttgcccgagtgggcgagcctcgttgt
ccggatcacgatttaccgttggcggcacaaaccatttcgcaaatggtggatagagtaatg
gaagagccggaaggcaagcgtttgatgttacttgcaccggtggtcaaagatcgtaaaggc
gaacacgtaaaattattggaaaatttgaccgcttccggctatatccgagccagaattgac
ggcgaaatctgtgatttatctgatccgccggcattggaattacagaaaaagcacacaatt
gaagtggtggtcgatcgctttaaagtgagaagtgatattacaacacgtttagcggaatcg
tttgaaacggcattggatttatccggttcgactgcgattattgctgatatggatgatccg
agtgcggacgaaatcgtcttttcgtctagttttgcttgtccgcattgcggctattcgtta
cacgaattagagcctcgtttgttctcatttaataacccagcgggtgcttgcccaacctgt
gacggcttaggggtagaacagtattttgacccgaacaaagtggtacagaatccggatgtc
tcgttagcgagtggtgcgattaaaggttgggatcgccgtagcttttactatttcggtttg
ttgaaatcggtggcggatcattatgatttttcactggatacgccatttaaagagctgact
aaaaaacaacgtgaaattattctgaacggttcaaaagacgaaattgaatttgtttatgtt
aatgatcgtggcgataaagtaaaacgtaaacatacctttgaaggtgtgttaaataatatg
gctcgccgttataaagaaaccgagtcgaattcggtgcgagaagaattagcgaaatatatc
aataatcgcccgtgtgtggagtgtgaaggttctcgcttacgccgtgaagctcgttacgta
tttttagataaaactaatttgccgatggtatcggagaaatcgattggcgaagcgttagaa
ttttttgaacagttagatcttgccggtcaaaaagcgaagattgcggagaaaattttaaaa
gaaattcgtgaacgtttgcagttcttggtcaatgtcggcttgaattacctctcgctttct
cgttcggcagaaaccttatctggtggtgaagctcaacgtattcgtttagccagccaaatc
ggtgcgggtttagttggggtaatgtatgtgcttgatgaaccgtctatcggcttgcaccaa
cgtgataacgaacgtttattaaataccttaattcatctgcgtaatttgggtaataccgtg
attgtggtggagcatgatgaagatgcgatccgtgcggcggatcatattgtggatatcggc
cctggggcaggtgtacatggtggtcaagttattgcgcaaggtacggcagaagaaattatg
caggtggaagattcgattaccggacaattcctttccggtaagcagaaaattgaaattccg
gcaaaacgagtgccttatgacgcagcaaaattgctcaccttaaaaggggcgagtggtaat
aacttaaaacaagtacagttggatattccggtgggtttattcacttgtattaccggtgtg
tcgggttcgggtaagtcgactttaatcaatgataccttgttcccgttagcacaaaatgca
ttaaatcgtgcggaacgtactgatgtcgcaccttatgaatcgattgatggcttgtcgcat
ttcgataaagtgattgatatcgaccaaagcccaattggacgtacgcctcgttcaaatccg
gcaacttataccggtttattcacgccgattcgtgaattatttgccggcacacaagaagcg
agagcgagaggctataatgtcggacgctttagttttaacgtgcgaggcggacgttgtgaa
gcctgccaaggcgatggcgtgattaaagtggaaatgcacttcctaccggatgtgtatgtg
ccgtgtgatcactgtaaaggtaaacgttataaccgagaaaccttggaaatccgttacaaa
ggcaaaacgattcatcaagtgctggatatgacggtggaagaggcgagagaattttttgca
ccggtgccggcgattgcgcgtaaattgcagacgttaatggatgtcggtttatcgtatatt
cgcttaggacagtcttcgactacactttccggcggcgaagcgcagcgtgttaaattagcg
accgagctttccaaacgtgataccggcaaaacgctgtatatcttagatgaaccgactacc
ggtttacattttgccgatattaaacaattactttcagtgctacacaaattgcgtgaccaa
ggcaatacaattgtggtgatcgagcataatttagatgtgattaaaactgccgactggatt
gttgatttaggccctgaaggcggttcgggtggcggacaaattattgcaaccggcacacca
gaagaggtagcgaaagacaaacgctcgcacacggcaagattcttaaaagagattttagcc
aaaggctaa
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