Actinobacillus suis ATCC 33415: ASU1_05940
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Entry
ASU1_05940 CDS
T03246
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ass
Actinobacillus suis ATCC 33415
Pathway
ass03030
DNA replication
ass03430
Mismatch repair
ass03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ASU1_05940 (dnaE)
03430 Mismatch repair
ASU1_05940 (dnaE)
03440 Homologous recombination
ASU1_05940 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ass03032
]
ASU1_05940 (dnaE)
03400 DNA repair and recombination proteins [BR:
ass03400
]
ASU1_05940 (dnaE)
Enzymes [BR:
ass01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ASU1_05940 (dnaE)
DNA replication proteins [BR:
ass03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ASU1_05940 (dnaE)
DNA repair and recombination proteins [BR:
ass03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ASU1_05940 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AIJ31451
LinkDB
All DBs
Position
1315861..1319337
Genome browser
AA seq
1158 aa
AA seq
DB search
MTQQRFVHLKVHSDFSMINGLAKVKPLVKTAVANNMVAMALTDFSNFCGLVKFYGEALGS
GLKPIIGADIFVRPEPDSEDFFELTLLAKNNTGYHNITLLLSKAYQQGYVEFPLVEKAWL
AELNEGIIVLSGGRNGDVGKALLKENEAEADELVSFYQQYFPNHYYLALCRTGRTDEERY
IQQAVPFSQKHQLPLVAVNDVVFLKEDDFDAHEIRVAIHDSYTLDDPKRPKKYSPQQYFR
SEQEMCALFADLPQAVENTVQIAMRCNVTVRLGEYFLPNFPTGDLSTEDFLVKKSREGLE
ERLEFLFPDPEERKNKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVADT
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYNFVDRISKLIPPDPGMTLAKAFDAEPKL
PELYEADEEVKDLIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSEGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINQRLAREGKEPVRIESIPLDDKKSFDLLL
ASKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGHEEV
SYPDAQYQHESLKPILEPTYGVIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMA
AQREIFEKGAIKQGIDGDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGFYDECINMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGV
GEGPVEAILEAREKDGIFKDLFDLTARVDLKKINRRTFEGLIMSGAFDKLGPHRAALMKN
LEDALKASDQHSKMEALGQSDMFGVLTETPEEVQNAYANTPKWSEQTILEGERTTLGLYL
SGHPIGRFLKELSHYAPVRLNELQPTRRGQVVTVAGIIMGSRIAVTKRGSRLGIATIEDR
SGKLDMTLFSEALETYGHLLEKDRIVIATGSVQFDDFSGGLKMSVREIATLDEARSRYAK
SLALAISQEQLTPQFVKELREIIEPNKEGTLPLHFYYQSPEGRALLRSGVEWRVTPKDEM
LDQLKTLLGENAVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacaacgtttcgttcatcttaaagtccatagtgatttctctatgattaacggt
ttggctaaagtaaaaccgttagtcaaaacagccgttgccaataatatggtggcaatggca
ctaaccgatttcagcaacttttgcggattggtaaaattttatggcgaagcgttaggttcc
gggttaaaaccgattatcggtgcggatattttcgtgcgtcccgaaccggacagcgaagat
ttctttgagctgacgttactggcaaaaaacaacaccggttatcacaatattactctttta
ctttcaaaagcttatcaacaaggttatgttgaatttccgttagtcgaaaaagcgtggctt
gccgagttaaatgagggcatcattgtgctttccggcggacgaaacggcgatgttggaaaa
gctctactcaaagaaaatgaagcggaagcagacgaattagttagcttttatcagcaatat
ttcccaaatcattactatctcgcgctctgtcgtactggccgtacggatgaagaacgctat
attcagcaagcggtgcctttttcacaaaaacaccaattaccgttagttgcggtaaatgat
gtagtgttcttgaaagaagacgattttgatgcgcacgaaattcgtgtagcaatccacgac
agctacaccttagatgatccaaagcgtccgaaaaaatattcaccgcaacaatatttccgt
agcgaacaagaaatgtgtgccttgtttgccgatttaccgcaagcggtcgaaaatacggta
caaattgcaatgcgatgcaatgtaaccgtacgtttaggcgaatatttcttaccgaatttc
ccaaccggcgatctttctaccgaagattttttagtgaaaaaatcacgtgaaggtttggaa
gaacgtttggaatttctattcccagatccggaagaacgcaaaaacaagcggtctgtttat
gatgaacgtttgcaagtcgagctggatgtaattaaccaaatgggcttccccggctacttc
ctaatcgtaatggaatttattcagtggtcgaaagataacgatattccggttggcccaggg
cgtggttccggtgcgggttctttagtggcgtatgcgttaaaaattaccgatttagacccg
cttgccttcgacttactctttgagcgtttcctaaatccggaacgtgtttcaatgcccgat
ttcgacgtcgatttctgtatggacggacgagatcgtgtgattgaacacgttgccgacact
tacggtcgccaagcggtttcacagatcattaccttcggtacgatggcggcaaaagcggta
atccgagatgtaggtcgtgtgcttggtcatccgtataattttgtcgatcgaatctcaaag
ctgattccgcccgatccgggtatgaccttggctaaagcctttgatgccgagccgaaactg
ccggaactttacgaagccgatgaagaagtgaaagacttgattgatatggcacgtaaattg
gaaggcgtaacccgaaatgccggcaaacacgccggtggtgtggtaatcgccccaaccgct
attaccgatttctcaccgctttattgcgattcggaaggacttcatccggtgactcacttc
gataaaaacgatgtggaatatgccggtttagtaaaatttgacttcttaggcttacggaca
ctcaccattattaaatgggcattggagatgatcaatcaacgcttagcccgagaaggcaaa
gagccggtacgtatcgaaagtattccgttagatgataagaaatcctttgatctgttactc
gcatcgaaaacaacggcggtattccagctagagtcacgcgggatgaaagatttgatttca
cgtctgaagcccgactgttttgaagatattatcgcattagtggcattattccgccccggt
ccgcttgaatccggcatggtacaaaactttatcgaccgtaaacatggtcacgaagaagtt
tcttaccctgatgcacaatatcaacacgaatcgcttaaaccgattttagaaccgacctat
ggtgttattgtttaccaagaacaggtaatgcaaatcgcacaggtgcttgccggttatacc
ctaggtggtgcggacttattacgccgtgcaatgggtaagaaaaaaccggaggaaatggcg
gcacagcgtgaaatcttcgaaaaaggggcaatcaaacaaggtattgatggcgatcttgcg
atgaaaatctttgacttggtggaaaaattcgccggttatggttttaacaaatcgcactct
gccgcttatgcgttggtttcttaccaaacattatggctgaaagcacactaccctgccgaa
tttatggcagcggtaatgacttcggagatggataataccgacaaaatcgttggcttttat
gacgaatgtatcaatatgggattaaccgttgttccgcctgatgtaaacagtggtaaacac
cgtttttcagtgaatgaaaaaggcgaaatcgtgtacggtttaggtgcaattaaaggtgtg
ggagaaggcccagttgaagcaattttagaagcgcgtgaaaaagacggtatcttcaaagat
ttatttgatttgaccgctcgagtcgatctgaaaaaaatcaatcgccgtacctttgaaggc
ttaattatgtcaggcgctttcgataaattaggtccgcatcgtgctgcattgatgaaaaat
ttagaagacgcactaaaagcttctgaccaacatagcaaaatggaagcactcggacaaagt
gatatgttcggtgtgctaactgaaacgccggaagaagtgcaaaatgcctatgcgaatacg
ccgaaatggtcggaacaaaccattttagaaggcgaacgcaccacactcggtttatattta
agcggtcacccaatcggacgattcttaaaagagttatcgcactatgcgccggtacgtcta
aatgaactacaaccgacacgccgtgggcaagtggtcaccgttgccggtattattatgggg
tcgcgtatcgccgtaactaaacgaggcagccgtcttgggattgcaaccattgaagatcgt
tccggtaaattagatatgacactattctcagaagctctcgaaacttacggccatctttta
gagaaagatcgtattgtgatcgcaaccggttcggtacaatttgatgattttagcggcggg
ttaaaaatgtcagtacgagaaatcgccactttagatgaagctcgcagtcgctatgcgaaa
agccttgctttagcgattagtcaagaacagcttactccgcaatttgtaaaagaattacga
gaaatcattgaaccgaataaggaagggacgttaccgctacatttctactaccaaagccct
gaaggcagagccttattgcgaagcggcgtagaatggcgagtaaccccgaaagatgaaatg
ctcgaccaactcaaaaccttacttggcgaaaatgccgtagaactggagttcgagtaa
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