Actinobacillus suis ATCC 33415: ASU1_08125
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Entry
ASU1_08125 CDS
T03246
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
ass
Actinobacillus suis ATCC 33415
Pathway
ass03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ass00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ASU1_08125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ass03400
]
ASU1_08125
Enzymes [BR:
ass01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ASU1_08125
DNA repair and recombination proteins [BR:
ass03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ASU1_08125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIJ31884
LinkDB
All DBs
Position
1805292..1808609
Genome browser
AA seq
1105 aa
AA seq
DB search
MFTVYHSQKLLSLAEMLIHLQKANPNPNPFSTETILVQSVGMAQWLQMQIADSIGVAGNY
DFLFPTSFLWQQYRVLFPSLPKENIFERSSVTWRLMRLIPAHLDTAEFSTLKSYLQQDAR
QYQLKLYQLSTKIADLFDQYLVYRPHWLVHWENNQLEAVLAEIMHSNVFKVKNEQEILAN
LQWQAILWNALIDDIKLDSDESVFITSHRAYLQDQYFQKLDNLTAQEKEKLPQRIFIFGI
SSLPATQLAVLKKLSEHCDIHLFFLNPSQEYWGDSVEDSALEKLALKQQLSETDLAALLE
KQGNQLLTMWGKQGREFLAQLVEQEFDYSLEVFDPYVGETNLIKLKNAILAFNNAQTFEL
DEQDQSLQFHSCHSVMREVEVLHNYLLQLFEQNPALTPKDIIVMSADIDKYAPYINAVFS
RFAHKDPRRIPFTLSDQKATAVDPIISSFLSLLNLKESNFNAEVLLDLLDVNAIRSRFRI
QSDDIYTLRHWIKEVGIRAGLTIEQNQWQNYNSWQNGLTRLLLGTSLKEESGIWQESIGF
NESYGLASELIGYLCHYLEKLSTWQKFIQTSHSIGVWQQKLAELINEFYQDDGEHFDSLS
MLQTTLQNVLEKIENARFEDEIAIEILASLLQENLNTQQNSLQFLAGKVNFCTLLPMRAI
PFKVVCLLGMNEADFPRQHSVNSFDLMQYAPKKGDRARRDDDRYLFLEALLSAQEIFYVS
YVGQSVTDNKARLPSVLVAQLLDYIGEHLSESAQQTLAETDIFSGMVKRHPMTVFSPRNF
IYPHISYDREWLKLFEQNAVQPNFLNGQLQSDSPTEINLNELISYITNPIKYFFNRQLGI
YFNYDEESIEESEKFTLNALDNYQLRTKLLTVDEEQAQALFYQEQLKGNLPSANFAKLSE
TALENSIKTMRNEISPYLKQSDILTVEQYFPIGSNKIKLYGNIQQLFDDEIVFWKVSSLK
DKDIIRFWIYYLVTQVQNNSIRLKYIVRNGEDTQIFQFNSITQQQVQEQLAIYIEDYLNS
FQALRWGISAGLDDYFAKIEDVENIEEYCCQKVFKLLEDNSFEASYLQRVLVQSSKLNYS
VIHHTTKQWFTLMQDSKPHNNKKEN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttaccattcacaaaagctattgtcattagcagaaatgctaattcatcta
caaaaagccaacccgaatcccaatccgttcagcaccgaaaccatacttgtacaaagtgtt
ggtatggcacaatggttacaaatgcaaatcgctgattccattggtgtggcgggtaattat
gactttttatttccaaccagctttttatggcaacaataccgtgtgctattcccttcgtta
ccgaaagaaaatatttttgaacgttcttcggtaacatggcgattaatgcgcctgattcct
gcccatttggacacggcagaattcagcacattaaaatcatacttgcagcaagatgcacgt
cagtaccaacttaaactctatcaactttcgactaaaattgcggatctattcgaccaatat
ttagtttatcgacctcattggcttgtacattgggaaaacaaccaacttgaagcggttctt
gctgaaatcatgcattccaatgtatttaaagttaaaaatgaacaagaaatcctagctaac
ctacaatggcaagctatcttatggaatgcgttaattgacgatattaaattagatagtgat
gaaagcgtctttatcacgtcgcatcgtgcttacttacaagatcagtacttccaaaaatta
gataatttaactgctcaagaaaaagaaaaacttccacagagaatctttattttcggtatt
tcatctctaccggcaactcaattagctgtattaaaaaagttaagtgaacactgcgatatt
cacttatttttcttaaacccaagtcaagaatattggggcgatagtgttgaagatagtgca
ttagaaaaattagccttgaaacaacagctatcggagaccgatttagccgctttactcgaa
aaacaaggtaatcaattgctcactatgtggggaaaacaagggcgagaatttttagcgcaa
ctagtagagcaagagttcgactatagtttagaagtatttgacccgtatgtcggcgaaacc
aatctcatcaagctcaaaaatgccattttagcgtttaataatgcacaaacttttgaatta
gacgaacaagaccaatcattacaatttcattcgtgccatagcgtaatgcgtgaagtagag
gtgttacataactatctcttacaattattcgagcagaatccggcattaacgcccaaagat
attattgtaatgtctgcggatattgataaatatgcgccttatattaatgcggtattttct
cgctttgctcataaagatccgagaagaattccttttacactttcagatcaaaaagcgact
gcggtagatccgattatcagcagctttttgagtctacttaatttaaaagaaagtaacttt
aacgcagaagtactattggatttattagatgtaaatgcgatccgaagccgttttcgcatc
caatctgatgatatttataccctacgtcattggataaaagaagtgggtatccgcgccgga
ttaactatcgagcaaaaccaatggcaaaactataactcatggcaaaacggtttaacccga
ttattgctcggcacaagcctcaaagaagaaagtggtatctggcaagagagtatcggattt
aacgaaagctatggtttagcttccgagcttatcggttacttatgccattatttagaaaaa
cttagtacgtggcagaaatttatccaaacatcacacagcattggtgtttggcaacaaaag
ctagctgagttaatcaatgagttttatcaagatgatggcgaacattttgattcgctctcc
atgttacaaacaacgttacagaacgtattagaaaaaattgaaaacgcacgctttgaagat
gaaattgctattgaaattctcgcctcgctactccaagagaatctcaacacgcagcaaaac
agcctgcagtttttagccggaaaagtgaatttctgtacgttattaccaatgcgagctatt
ccatttaaagtggtttgtttgctcggtatgaatgaggctgattttcctagacaacattcg
gtaaatagcttcgatttaatgcaatacgcaccaaaaaaaggggatcgcgcacgcagagac
gatgaccgttacctatttttagaggctttactttcagcccaagagattttctacgtaagc
tatgtcgggcaatcggtaacggataataaagcacgcttaccttccgttttagttgcacaa
ttattagattatatcggagaacatttatccgaatcggctcaacagacgctagctgaaaca
gatattttcagtggtatggtgaaacgccatcctatgacagtatttagcccaagaaacttc
atctatcctcacatctcttatgatagagaatggctaaaactatttgaacagaatgcggtt
cagccgaatttcttaaatggacagcttcaatcggatagcccaacagaaattaatttaaat
gaattaattagttatattacaaatccaattaaatatttctttaaccgccaattgggtatt
tattttaattacgatgaagaaagtattgaagaatcagaaaagtttactttgaatgcattg
gataattaccagttaagaaccaaattattaacagttgatgaggaacaagcgcaagcttta
ttttaccaagaacagttaaaaggtaacttgccttcagccaactttgctaagctatctgaa
accgcgttggaaaactcaataaaaactatgagaaatgaaatatcgccatacttaaaacag
agtgatattttaactgttgaacaatatttcccaataggttcaaataaaataaaactctat
ggaaacatccaacaattatttgacgatgaaatcgttttttggaaagtaagttcattaaaa
gataaagatattatccgtttttggatttattatttagtaacacaagtgcaaaataattct
attcgtttgaaatatattgtgcgtaacggcgaagatactcaaatcttccaatttaattcg
atcactcagcagcaagtgcaggaacaattagctatttatatagaagattaccttaatagc
tttcaagcgctacgctgggggatttctgccggtttagacgattattttgccaaaatagaa
gatgttgagaatattgaagaatattgttgtcagaaagtttttaaattactggaagacaat
tcgtttgaagctagttacctacagcgagttttagtacaaagttccaaattgaattacagt
gttattcatcatacaacaaaacaatggtttactttaatgcaagacagtaagccacataac
aataaaaaggagaattaa
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