KEGG   Archaeoglobus sulfaticallidus: Asulf_00077
Entry
Asulf_00077       CDS       T02642                                 
Name
(GenBank) Intein/homing endonuclease
  KO
K04801  replication factor C small subunit
Organism
ast  Archaeoglobus sulfaticallidus
Pathway
ast03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ast00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Asulf_00077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ast03032]
    Asulf_00077
DNA replication proteins [BR:ast03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     Asulf_00077
SSDB
Motif
Pfam: Rep_fac_C Intein_splicing AAA DNA_pol3_delta2 LAGLIDADG_3 RCF1-5-like_lid RuvB_N AAA_assoc_2 AAA_22 Gp44_lid Rad17 AAA_16 Mg_chelatase AAA_7 ResIII TIP49 Hom_end nSTAND3 AAA_18 IstB_IS21 DUF4145
Other DBs
NCBI-ProteinID: AGK60113
UniProt: N0BAU1
LinkDB
Position
63304..65601
AA seq 765 aa
MLESEIWVEKYRPKTLDEVVGQHAIVQRLKGYVEKRNIPHLLFAGPPGTGKTASAIALTR
DLFGENWRDNFIEMNASVSKSTPVTVRVNGAVERLTFEDLDRMYFNGCGDDVEYADAGDL
EVLTVDEKYRVRWARVSKIIRHKARKILRVRVEGGGVIELTGNHAVMLLDKNGSLVAKKA
SEIKEGDFFISFVSKLGGSLNKLSFSDYLPRSVTSRVRVIDELEVNELVSWSFGAYAAEG
AVSIRGDTSGQVVYTFGSNELEQIGRIKEFSESLGLKIYETYTSSGFDRSKYSAKQIKVL
STQLAKFVRDNFYDGYGFKAKNKRIPGFVYELPFEAKMAFLRGLADGDGYGEWANIVRIS
SASKDLLIDVAWLSRMTGIESSIFDREVRLIWKGGMGYQKSELLPAEIFVNFFERISDKI
EGNWRYEMRHQLYENRKTVSKQTLKKILDMVDVESLTEKEKEVLKNLRNLVNSDLHVLRV
REIEAVDYNDFVYDVSVPGNEMFFAGNVPVLLHNSDERGIDVVRHKIKEFARTAPIGDAP
FKIIFLDEADALTADAQAALRRTMEMYSKICRFILSCNYVSRIIEPIQSRCAVFKFRPIS
EEAMKKKLLEICEKENVEITEDGLQALIYVSGGDFRKAINALQGAATFGEKIDAEVIFQI
TATARPEEVKDLLELALSGNFLEAREKLEHLLIEYGMSGEDVVNQLFKEIISSSLDERLK
VVLIDKLGEIDFRLTEGSNERIQLDAYLAFLSTIAKRKKEKVEKE
NT seq 2298 nt   +upstreamnt  +downstreamnt
atgctcgaatcggaaatttgggtggaaaaatacaggcctaaaacgctcgatgaggttgtt
ggtcagcatgccattgttcaaaggcttaagggttatgttgaaaagaggaacatacctcat
ttactcttcgccggacctcccggtacaggaaagaccgcttcagcaatagccctgacaaga
gacctgttcggagagaactggagagataatttcatagagatgaatgcatcggtttctaag
agtacacctgttacggtcagagttaatggtgctgttgaaaggttaactttcgaagatcta
gacaggatgtactttaacggctgtggcgatgatgtcgagtacgcagatgccggagatctg
gaagttcttactgttgatgaaaaatacagggtcagatgggcgagagtatccaaaataata
agacacaaagccagaaagattctcagagttcgtgtagaaggtggtggagtaattgaactg
actggaaatcacgcagttatgttgcttgacaaaaacggtagcctcgtcgcaaagaaggca
agcgaaataaaagaaggggatttcttcatatctttcgtgtcaaaacttggtgggtctctt
aataagctgtcattttctgactacctgccccgatccgtaacttcgagagttagggttata
gatgagctggaggttaacgagcttgtttcatggtctttcggtgcttacgctgcggaagga
gcggtaagcatcagaggtgacacttcagggcaggtagtatatacgtttggaagcaatgaa
cttgaacagattggcaggataaaggagttttcggaatctcttggactaaaaatatacgaa
acatacacttcgtcgggctttgataggagcaagtactcggcgaaacagatcaaagttctg
agcacgcagcttgctaagtttgttagagataacttttacgatggctacggttttaaggct
aaaaacaagagaattccgggatttgtttatgaattgccgtttgaagcgaagatggcattt
ctaagagggttggctgacggcgatggctatggtgaatgggcaaatattgtgaggatttcc
tcagcgtcgaaagatttgctgatagatgtggcatggctttccagaatgacgggtatagaa
agctctattttcgatagagaggttagattaatctggaaaggtggcatgggttatcagaaa
tctgagttgttgccagcggagatattcgtgaatttctttgaaagaataagcgataaaatc
gaaggtaactggcgctacgaaatgaggcatcagctatacgaaaacaggaaaacagtttca
aagcaaacactgaagaaaattctggacatggtggatgtagaaagtttgactgagaaggaa
aaagaagtcttgaaaaacttgagaaacctcgttaattcagatttacacgttctcagggtc
agggagatagaggctgtggattacaacgacttcgtatacgatgtctcagtgcccggtaac
gaaatgttctttgctggaaatgtaccggtacttctacacaattcagacgagaggggtatt
gatgttgttagacacaagataaaggagttcgctagaacggctccaattggagatgctccg
ttcaagataatatttctggatgaggctgatgcccttactgctgatgcacaggctgctttg
agaagaacgatggagatgtactcaaagatatgcaggttcattctaagctgcaactatgtt
agcagaattatcgagccaatacagagcagatgtgctgtcttcaagttcaggccgatatcg
gaggaggcaatgaagaagaagctcctcgagatctgtgagaaggagaatgttgagataacc
gaagatggtttgcaggctctgatatatgtctcaggaggagacttcaggaaggccataaac
gcccttcagggagctgcgactttcggagaaaaaattgatgctgaggtcatattccagatc
acggcaaccgccagacctgaggaagtgaaggatttgcttgagctggctttatcaggaaac
tttctggaggcaagagagaagctcgaacacctgctcatagagtacggcatgtctggagag
gatgtcgtgaaccagcttttcaaagagatcatatcctccagccttgatgaaaggctgaaa
gtcgttctgatcgataagcttggagagattgatttcagattgactgagggatccaatgag
agaatccagctcgatgcataccttgcattcctatcaaccatagcgaaaaggaaaaaggaa
aaagttgaaaaggagtga

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