KEGG   Archaeoglobus sulfaticallidus: Asulf_00086
Entry
Asulf_00086       CDS       T02642                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit E
  KO
K15171  transcription elongation factor SPT4
Organism
ast  Archaeoglobus sulfaticallidus
Brite
KEGG Orthology (KO) [BR:ast00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Asulf_00086
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ast03021]
    Asulf_00086
   03019 Messenger RNA biogenesis [BR:ast03019]
    Asulf_00086
Transcription machinery [BR:ast03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     Asulf_00086
  RNA polymerase I system
     Asulf_00086
Messenger RNA biogenesis [BR:ast03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     Asulf_00086
SSDB
Motif
Pfam: Spt4 Zn_ribbon_3 NRDD zn-ribbon_14 Zn_Ribbon_TF
Other DBs
NCBI-ProteinID: AGK60122
UniProt: N0BD10
LinkDB
Position
complement(73360..73548)
AA seq 62 aa
MVDYACKKCKYISHESVVCKNCGSSDLTKEWYGYVVIIDPEKSQIAEKLGVKIPGKYAIK
VD
NT seq 189 nt   +upstreamnt  +downstreamnt
atggtagattacgcgtgtaagaagtgcaagtacataagccacgagtctgtggtctgcaag
aattgcggaagctccgatctaaccaaggaatggtacggatatgttgtcataatcgaccct
gaaaaaagccagattgcagagaagctcggtgtaaagatacccggcaagtacgcgataaag
gttgactga

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